Q1AT26 (Q1AT26_RUBXD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase E1 component EMBL ABG05452.1
EC=1.2.4.2 EMBL ABG05452.1

Gene names

Ordered Locus Names:

Rxyl_2535

Organism

Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) [Complete proteome] [HAMAP]

Taxonomic identifier

266117 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Rubrobacteridae › Rubrobacterales › Rubrobacterineae › Rubrobacteraceae › Rubrobacter

Protein attributes

Sequence length	946 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	Thiamine pyrophosphate SAAS SAAS001017
Molecular function	Oxidoreductase EMBL ABG05452.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1AT26 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: 75277F814F8158DA	FASTA	946	106,630
	10 20 30 40 50 60 MEQQQTESQF YGPNLGYVLE LYERYREDPG SVDEETRRFF ERWSPPRIEV DGRVAGAALE 70 80 90 100 110 120 AEKYVGAAKY IRSIRDFGHS AARLDPLGGE PPGDPALDPA FHGITEEDLE RMPSSIVGGP 130 140 150 160 170 180 IAERTSNARE AVEELKRIYC KTTGYDFGHI AHLPEERFWL RDAVESEQFY QRLEGEAARR 190 200 210 220 230 240 LLRRLTRVDT FEKFLHRTFL GQKRFSVEGN DMVVPMLDRL IRHAADAGTP EVVMGMAHRG 250 260 270 280 290 300 RLNVLAHVLN KPYAKIFGEF QQPERGEQSS VSEMSGEGWV GDVKYHLGVR NFHLEEGQED 310 320 330 340 350 360 AKVLINLAPN PSHLEHVNPV VSGMTRAAQE RRDEAGPPRQ DVDAALSIVL HGDAAFPGEG 370 380 390 400 410 420 VAAETLNLYR LPGYRVGGTI HIITNNQLGF TTEKEDARST TYASDLAKGY EIPVVHVNAD 430 440 450 460 470 480 DPEACLAAVS LAYAYRQRFH KDFMIDLIGY RRYGHNEGDE PVYTQPVMYE KIRNHPTVRE 490 500 510 520 530 540 IWARTLEERG VISEGEAEKM AEEMFARMQE IHKNPSEQLT EEDFDTEEPH TPLVDIPETA 550 560 570 580 590 600 VEASRLEALN RAMLERPEGF SPNRKLERLF QKNRGSLERI DWAHAEALAF ASLLEDGIPI 610 620 630 640 650 660 RLTGQDSERG TFSQRHAVLH DEKTGEEYVP LQNIPQARAS FDIHNSPLSE MAVMGFEYGY 670 680 690 700 710 720 SVNAPDALTL WEAQYGDFAN VGQPIIDQFI VSGQAKWGQV SNLVLLLPHG YEGQGPEHSS 730 740 750 760 770 780 ARLERFLQLA AGENIRVANP TTAAQYFHLL RAQAILKDHK RPLVLMTPKS LLRHPMAASG 790 800 810 820 830 840 LQELAEGRFH PVLDDEEARE RAGSVERLIL CSGKIYTELV GSDFREEAEE VAIARVELLY 850 860 870 880 890 900 PFPEGQIREV IAGYPNLREL VWVQEEPKNM GAWFFMEPRL REITGGELPI RYVGKPARPS 910 920 930 940 PAQGSVSFHR REHAQIVREA FRRDSRGREK AEAGVQAARS RGGVSD

References

[1]

"Complete sequence of Rubrobacter xylanophilus DSM 9941." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., da Costa M.S., Rainey F.A., Empadinhas N., Jolivet E., Battista J.R., Richardson P. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 9941 / NBRC 16129.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000386 Genomic DNA. Translation: ABG05452.1.
RefSeq	YP_645264.1. NC_008148.1.
3D structure databases
ProteinModelPortal	Q1AT26.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1AT26.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4115595.
GenomeReviews	Gene locus Rxyl_2535 in contig CP000386_GR.
KEGG	rxy:Rxyl_2535.
NMPDR	fig|266117.6.peg.2204.
PATRIC	23371850. VBIRubXyl52678_2500.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0567.
HOGENOM	HBG289950.
OMA	EGDEPAF.
PhylomeDB	Q1AT26.
ProtClustDB	PRK09404.
Enzyme and pathway databases
BioCyc	RXYL266117:RXYL_2535-MONOMER.
Family and domain databases
InterPro	IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
KO	K00164.
PANTHER	PTHR23152. 2oxoglutarate_DH_E1. 1 hit.
Pfam	PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1AT26_RUBXD

Accession

Primary (citable) accession number: Q1AT26

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)