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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Rxyl_2903

Organism
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciRXYL266117:GH8O-2965-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
Gene namesi
Ordered Locus Names:Rxyl_2903Imported
OrganismiRubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)Imported
Taxonomic identifieri266117 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaRubrobacteridaeRubrobacteralesRubrobacterineaeRubrobacteraceaeRubrobacter
ProteomesiUP000006637: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi266117.Rxyl_2903.

Structurei

3D structure databases

ProteinModelPortaliQ1AS14.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiYHAQYPN.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1AS14-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLRAARIRTE IPGPRSRALT ERRRRAISAG LGTALPIWVA EAHGALVTDV
60 70 80 90 100
DGNTFIDFGG GIGVLNAGHT HPRVVEAVRE QVGRLTHACY YVSQYEPYLE
110 120 130 140 150
LAEKLNELVP GNFEKRSIFV NSGAEAVENA IKISRSYTRR PAILAFENAF
160 170 180 190 200
HGRTMLGMSL TGKADPYRRG FGPFVPEVYR VPAPYAYRMP KEESWFDAFR
210 220 230 240 250
RSLVSVDVSS VAAVIVEPVL GEGGFIPFPP EDLRRLREWC TENGAVMVVD
260 270 280 290 300
EVQTGFGRTG KMFAIEHSGV EPDIVTTAKS LGGGMPIAGV TGRAEIMDSV
310 320 330 340 350
HAGGLGTTYG GNPAACAAAL AVIRAFEEEN LLERSVRVGE RVMEELRAIQ
360 370 380 390 400
RRHPDFVGDV RGLGAMAAME LVTDARSKTP DPARTKGVVE HALQEGLMLL
410 420 430
TAGAYGNVIR TLMPLVITDS ELEEGLSILS RAVDAAAA
Length:438
Mass (Da):47,370
Last modified:July 11, 2006 - v1
Checksum:i69CA099177B86753
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000386 Genomic DNA. Translation: ABG05814.1.
RefSeqiWP_011565823.1. NC_008148.1.
YP_645626.1. NC_008148.1.

Genome annotation databases

EnsemblBacteriaiABG05814; ABG05814; Rxyl_2903.
GeneIDi4117383.
KEGGirxy:Rxyl_2903.
PATRICi23372612. VBIRubXyl52678_2876.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000386 Genomic DNA. Translation: ABG05814.1.
RefSeqiWP_011565823.1. NC_008148.1.
YP_645626.1. NC_008148.1.

3D structure databases

ProteinModelPortaliQ1AS14.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266117.Rxyl_2903.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG05814; ABG05814; Rxyl_2903.
GeneIDi4117383.
KEGGirxy:Rxyl_2903.
PATRICi23372612. VBIRubXyl52678_2876.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiYHAQYPN.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciRXYL266117:GH8O-2965-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 9941 / NBRC 16129Imported.

Entry informationi

Entry nameiQ1AS14_RUBXD
AccessioniPrimary (citable) accession number: Q1AS14
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: February 4, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.