Q1AS14 (Q1AS14_RUBXD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase EMBL ABG05814.1
EC=2.6.1.19 EMBL ABG05814.1

Gene names

Ordered Locus Names:

Rxyl_2903

Organism

Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) [Complete proteome] [HAMAP] EMBL ABG05814.1

Taxonomic identifier

266117 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Rubrobacteridae › Rubrobacterales › Rubrobacterineae › Rubrobacteraceae › Rubrobacter › Rubrobacter xylanophilus

Protein attributes

Sequence length	438 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL ABG05814.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1AS14 [UniParc]. Last modified July 11, 2006. Version 1. Checksum: 69CA099177B86753	FASTA	438	47,370
	10 20 30 40 50 60 MLRAARIRTE IPGPRSRALT ERRRRAISAG LGTALPIWVA EAHGALVTDV DGNTFIDFGG 70 80 90 100 110 120 GIGVLNAGHT HPRVVEAVRE QVGRLTHACY YVSQYEPYLE LAEKLNELVP GNFEKRSIFV 130 140 150 160 170 180 NSGAEAVENA IKISRSYTRR PAILAFENAF HGRTMLGMSL TGKADPYRRG FGPFVPEVYR 190 200 210 220 230 240 VPAPYAYRMP KEESWFDAFR RSLVSVDVSS VAAVIVEPVL GEGGFIPFPP EDLRRLREWC 250 260 270 280 290 300 TENGAVMVVD EVQTGFGRTG KMFAIEHSGV EPDIVTTAKS LGGGMPIAGV TGRAEIMDSV 310 320 330 340 350 360 HAGGLGTTYG GNPAACAAAL AVIRAFEEEN LLERSVRVGE RVMEELRAIQ RRHPDFVGDV 370 380 390 400 410 420 RGLGAMAAME LVTDARSKTP DPARTKGVVE HALQEGLMLL TAGAYGNVIR TLMPLVITDS 430 ELEEGLSILS RAVDAAAA

References

[1]

"Complete sequence of Rubrobacter xylanophilus DSM 9941." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., da Costa M.S., Rainey F.A., Empadinhas N., Jolivet E., Battista J.R., Richardson P. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 9941 / NBRC 16129.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000386 Genomic DNA. Translation: ABG05814.1.
RefSeq	YP_645626.1. NC_008148.1.
3D structure databases
ProteinModelPortal	Q1AS14.
ModBase	Search...
Protein-protein interaction databases
STRING	266117.Rxyl_2903.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABG05814; ABG05814; Rxyl_2903.
GeneID	4117383.
KEGG	rxy:Rxyl_2903.
PATRIC	23372612. VBIRubXyl52678_2876.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0160.
HOGENOM	HOG000020206.
KO	K07250.
OMA	ICFAKSI.
Enzyme and pathway databases
BioCyc	RXYL266117:GH8O-2967-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00700. GABAtrnsam. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1AS14_RUBXD

Accession

Primary (citable) accession number: Q1AS14

Entry history

Integrated into UniProtKB/TrEMBL:	July 11, 2006
Last sequence update:	July 11, 2006
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)