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Q1AS14 (Q1AS14_RUBXD) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.19 EMBL ABG05814.1
Gene names
Ordered Locus Names:Rxyl_2903 EMBL ABG05814.1
OrganismRubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) [Complete proteome] [HAMAP] EMBL ABG05814.1
Taxonomic identifier266117 [NCBI]
Taxonomic lineageBacteriaActinobacteriaRubrobacteridaeRubrobacteralesRubrobacterineaeRubrobacteraceaeRubrobacter

Protein attributes

Sequence length438 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
Q1AS14 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 69CA099177B86753

FASTA43847,370
        10         20         30         40         50         60 
MLRAARIRTE IPGPRSRALT ERRRRAISAG LGTALPIWVA EAHGALVTDV DGNTFIDFGG 

        70         80         90        100        110        120 
GIGVLNAGHT HPRVVEAVRE QVGRLTHACY YVSQYEPYLE LAEKLNELVP GNFEKRSIFV 

       130        140        150        160        170        180 
NSGAEAVENA IKISRSYTRR PAILAFENAF HGRTMLGMSL TGKADPYRRG FGPFVPEVYR 

       190        200        210        220        230        240 
VPAPYAYRMP KEESWFDAFR RSLVSVDVSS VAAVIVEPVL GEGGFIPFPP EDLRRLREWC 

       250        260        270        280        290        300 
TENGAVMVVD EVQTGFGRTG KMFAIEHSGV EPDIVTTAKS LGGGMPIAGV TGRAEIMDSV 

       310        320        330        340        350        360 
HAGGLGTTYG GNPAACAAAL AVIRAFEEEN LLERSVRVGE RVMEELRAIQ RRHPDFVGDV 

       370        380        390        400        410        420 
RGLGAMAAME LVTDARSKTP DPARTKGVVE HALQEGLMLL TAGAYGNVIR TLMPLVITDS 

       430 
ELEEGLSILS RAVDAAAA 

« Hide

References

[1]"Complete sequence of Rubrobacter xylanophilus DSM 9941."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., da Costa M.S., Rainey F.A., Empadinhas N., Jolivet E., Battista J.R., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 9941 / NBRC 16129.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000386 Genomic DNA. Translation: ABG05814.1.
RefSeqYP_645626.1. NC_008148.1.

3D structure databases

ProteinModelPortalQ1AS14.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266117.Rxyl_2903.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG05814; ABG05814; Rxyl_2903.
GeneID4117383.
KEGGrxy:Rxyl_2903.
PATRIC23372612. VBIRubXyl52678_2876.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK07250.
OMAERANVIG.
OrthoDBEOG6QVRHN.

Enzyme and pathway databases

BioCycRXYL266117:GH8O-2965-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1AS14_RUBXD
AccessionPrimary (citable) accession number: Q1AS14
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: November 13, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)