Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q1ARZ9 (Q1ARZ9_RUBXD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Putative PAS/PAC sensor protein EMBL ABG05829.1
Gene names
Ordered Locus Names:Rxyl_2919
OrganismRubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) [Complete proteome] [HAMAP] EMBL ABG05829.1
Taxonomic identifier266117 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Rubrobacteridae › Rubrobacterales › Rubrobacterineae › Rubrobacteraceae › Rubrobacter ›

Protein attributes

Sequence length581 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q1ARZ9 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: C03FA5743CBB6503

FASTA58163,954
        10         20         30         40         50         60 
MNATHPGWLE GDPWERQGAE GTRRLLERAV AASSGGIVIT DPNLPDNPII YVNPAFERIT 

        70         80         90        100        110        120 
GYSRREVVGR NCRFLQREDR GQAELEVLRQ AMAERRDCRV VLRNYRRDGR MFWNELYVSP 

       130        140        150        160        170        180 
VYDEDGRLVN FIGVQNDITE RKRMEEERNL LLAREQLARA EAVKAQRRLS FLAGADALLL 

       190        200        210        220        230        240 
STVDYPGRLR QTARIAVPEL ADWCVVDVLN EDGSVRQIAA AHAEPSREEL LEELGRIRER 

       250        260        270        280        290        300 
HGRPPGLVAR VLKEGRPVLV ERVGEGALEE NALGPDHLEV LRRLEVRSLI VVPLLARGRT 

       310        320        330        340        350        360 
IGAMSLVSSR EDRSYGEEEL SLARSLAYRC ALAVDNARLY HERGRIASIL QQSLLPRLPE 

       370        380        390        400        410        420 
PEGLDVGVEY LPVGRENEAG GDFYDLIETG RGWLAVIGDV RGKGAAAAAI TALARYTIRA 

       430        440        450        460        470        480 
VAMREGSPSR VLSDLNEAML RQLEGHRFCT VACAGLSRNG AGLELSVARA GHPAPLLLRR 

       490        500        510        520        530        540 
DGRVETLEVP GRALGVFADP RLAERPAHLE PGDAAVFYTD GVTEVRSPGG SLFGEERLRR 

       550        560        570        580 
LLGSCAGLGA GRIAARVREE ALKHGGGGLR DDLAVLVVRA A

« Hide

References

[1]"Complete sequence of Rubrobacter xylanophilus DSM 9941."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., da Costa M.S., Rainey F.A., Empadinhas N., Jolivet E., Battista J.R., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 9941 / NBRC 16129.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000386 Genomic DNA. Translation: ABG05829.1.
RefSeqYP_645641.1. NC_008148.1.

3D structure databases

ProteinModelPortalQ1ARZ9.
ModBaseSearch...

Protein-protein interaction databases

STRING266117.Rxyl_2919.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG05829; ABG05829; Rxyl_2919.
GeneID4117398.
KEGGrxy:Rxyl_2919.
PATRIC23372646. VBIRubXyl52678_2893.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2202.
HOGENOMHOG000000084.
OMANGVLHGW.

Enzyme and pathway databases

BioCycRXYL266117:GH8O-2983-MONOMER.

Family and domain databases

InterProIPR003018. GAF.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR001932. PP2C-like.
[Graphical view]
PfamPF13185. GAF_2. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00065. GAF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF81606. PP2C-related. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1ARZ9_RUBXD
AccessionPrimary (citable) accession number: Q1ARZ9
Entry history
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info