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Protein
Submitted name:

Putative PAS/PAC sensor protein

Gene

Rxyl_2919

Organism
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciRXYL266117:GH8O-2981-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative PAS/PAC sensor proteinImported
Gene namesi
Ordered Locus Names:Rxyl_2919Imported
OrganismiRubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)Imported
Taxonomic identifieri266117 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaRubrobacteriaRubrobacteralesRubrobacterineaeRubrobacteraceaeRubrobacter
ProteomesiUP000006637 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi266117.Rxyl_2919.

Structurei

3D structure databases

ProteinModelPortaliQ1ARZ9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000000084.
OMAiYWALETI.
OrthoDBiEOG65J50P.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom-like.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF13185. GAF_2. 1 hit.
PF13426. PAS_9. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
PS51746. PPM_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1ARZ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNATHPGWLE GDPWERQGAE GTRRLLERAV AASSGGIVIT DPNLPDNPII
60 70 80 90 100
YVNPAFERIT GYSRREVVGR NCRFLQREDR GQAELEVLRQ AMAERRDCRV
110 120 130 140 150
VLRNYRRDGR MFWNELYVSP VYDEDGRLVN FIGVQNDITE RKRMEEERNL
160 170 180 190 200
LLAREQLARA EAVKAQRRLS FLAGADALLL STVDYPGRLR QTARIAVPEL
210 220 230 240 250
ADWCVVDVLN EDGSVRQIAA AHAEPSREEL LEELGRIRER HGRPPGLVAR
260 270 280 290 300
VLKEGRPVLV ERVGEGALEE NALGPDHLEV LRRLEVRSLI VVPLLARGRT
310 320 330 340 350
IGAMSLVSSR EDRSYGEEEL SLARSLAYRC ALAVDNARLY HERGRIASIL
360 370 380 390 400
QQSLLPRLPE PEGLDVGVEY LPVGRENEAG GDFYDLIETG RGWLAVIGDV
410 420 430 440 450
RGKGAAAAAI TALARYTIRA VAMREGSPSR VLSDLNEAML RQLEGHRFCT
460 470 480 490 500
VACAGLSRNG AGLELSVARA GHPAPLLLRR DGRVETLEVP GRALGVFADP
510 520 530 540 550
RLAERPAHLE PGDAAVFYTD GVTEVRSPGG SLFGEERLRR LLGSCAGLGA
560 570 580
GRIAARVREE ALKHGGGGLR DDLAVLVVRA A
Length:581
Mass (Da):63,954
Last modified:July 11, 2006 - v1
Checksum:iC03FA5743CBB6503
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000386 Genomic DNA. Translation: ABG05829.1.

Genome annotation databases

EnsemblBacteriaiABG05829; ABG05829; Rxyl_2919.
KEGGirxy:Rxyl_2919.
PATRICi23372646. VBIRubXyl52678_2893.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000386 Genomic DNA. Translation: ABG05829.1.

3D structure databases

ProteinModelPortaliQ1ARZ9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266117.Rxyl_2919.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG05829; ABG05829; Rxyl_2919.
KEGGirxy:Rxyl_2919.
PATRICi23372646. VBIRubXyl52678_2893.

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000000084.
OMAiYWALETI.
OrthoDBiEOG65J50P.

Enzyme and pathway databases

BioCyciRXYL266117:GH8O-2981-MONOMER.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom-like.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF13185. GAF_2. 1 hit.
PF13426. PAS_9. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
PS51746. PPM_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 9941 / NBRC 16129Imported.

Entry informationi

Entry nameiQ1ARZ9_RUBXD
AccessioniPrimary (citable) accession number: Q1ARZ9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: July 22, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.