Reviewed, UniProtKB/Swiss-Prot Q19V59 (NDHH_CHLAT)

Names and origin

Protein names

Recommended name:
    NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
    EC=1.6.5.-
Alternative name(s):
    NAD(P)H dehydrogenase subunit H
    NADH-plastoquinone oxidoreductase subunit H
    NADH-plastoquinone oxidoreductase 49 kDa subunit

Gene names

Name:

ndhH

Encoded on

Plastid; Chloroplast

Organism

Chlorokybus atmophyticus (Soil alga)

Taxonomic identifier

3144 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Chlorokybophyceae › Chlorokybales › Chlorokybaceae › Chlorokybus

Protein attributes

Sequence length	393 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient By similarity.
Catalytic activity	NAD(P)H + plastoquinone = NAD(P)+ + plastoquinol. HAMAP MF_01358
Subunit structure	NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus By similarity.
Subcellular location	Plastid › chloroplast thylakoid membrane; Peripheral membrane protein; Stromal side By similarity.
Sequence similarities	Belongs to the complex I 49 kDa subunit family.

Ontologies

Keywords
Biological process	Transport
Cellular component	Chloroplast Membrane Plastid Thylakoid
Ligand	NAD NADP Plastoquinone
Molecular function	Oxidoreductase
PTM	Quinone
Gene Ontology (GO)
Biological process	oxidation reduction Inferred from electronic annotation. Source: HAMAP photosynthesis, light reaction Inferred from electronic annotation. Source: HAMAP transport Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	chloroplast thylakoid membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	NAD or NADH binding Inferred from electronic annotation. Source: InterPro electron carrier activity Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on NADH or NADPH Inferred from electronic annotation. Source: InterPro quinone binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 393	393	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic HAMAP MF_01358		PRO_0000357976

Sequences

	Sequence		Length	Mass (Da)
	Q19V59-1 [UniParc]. Last modified February 20, 2007. Version 2. Checksum: CE97558666C4F625	FASTA	393	45,448
	10 20 30 40 50 60 MTMLETKTDP MVISMGPHHP SMHGVLRLIV TLDGENVIDC EPVLGYLHRG MEKIAENRTI 70 80 90 100 110 120 VQYLPYVTRW DYLATMFTEA ITVNAPERLA NIEVPKRASY IRVIMLELSR IASHLLWLGP 130 140 150 160 170 180 FMADIGAQTP FFYIFREREM IYDLFEAATG MRMMHNYFRI GGVAADLPYG WVDKCLDFCD 190 200 210 220 230 240 YFLPKVDEYE RLITNNPIFL KRVKDIGKIS KEDAINWGLS GPMLRASGVK WDLRKVDNYE 250 260 270 280 290 300 CYDELDWSIQ WQSDGDCLAR YQVRIGEMRE SIKIIQQALK AIPGGPYENL EARRLSKGRK 310 320 330 340 350 360 SEWNNFEYQF IGKKPSPTFK MPKQEHYVRV EAPKGELGVF LIGDDNVFPW RWKIRAPGFI 370 380 390 NVQILPQLVQ GMKLADIMTI LGSIDIIMGE VDR

References

[1]

"A clade uniting the green algae Mesostigma viride and Chlorokybus atmophyticus represents the deepest branch of the Streptophyta in chloroplast genome-based phylogenies." Lemieux C., Otis C., Turmel M. BMC Biol. 5:2-2(2007) [PubMed: 17222354] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SAG 48.80.

Cross-references

Sequence databases
EMBLGenBankDDBJ	DQ422812 Genomic DNA. Translation: ABD62196.2.
RefSeq	YP_001019161.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	4783193.
Family and domain databases
HAMAP	MF_01358. [Tree]
InterPro	IPR001135. NADH_Q_OxRdtase_suD. IPR014029. NADH_UbQ_OxRdtase_su-49kDa_CS. [Graphical view]
Pfam	PF00346. Complex1_49kDa. 1 hit. [Graphical view]
PROSITE	PS00535. COMPLEX1_49K. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

NDHH_CHLAT

Accession

Primary (citable) accession number: Q19V59

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 16, 2008
Last sequence update:	February 20, 2007
Last modified:	June 16, 2009
This is version 23 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)