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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_F33G12.2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

ReactomeiR-CEL-5674135. MAP2K and MAPK activation.
SignaLinkiQ19986.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_F33G12.2Imported, F33G12.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiF33G12.2; CE27149; WBGene00018014.

PTM / Processingi

Proteomic databases

EPDiQ19986.
PaxDbiQ19986.
PRIDEiQ19986.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
R07E5.1Q218274EBI-2417030,EBI-2412202

Protein-protein interaction databases

IntActiQ19986. 1 interaction.
STRINGi6239.F33G12.2.

Structurei

3D structure databases

ProteinModelPortaliQ19986.
SMRiQ19986. Positions 18-294.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini12 – 263252WD_REPEATS_REGIONInterPro annotationAdd
BLAST

Keywords - Domaini

RepeatUniRule annotation

Phylogenomic databases

eggNOGiKOG0316. Eukaryota.
ENOG410XRZ0. LUCA.
GeneTreeiENSGT00840000129765.
HOGENOMiHOG000091642.
InParanoidiQ19986.
KOiK13124.
OMAiATNENRI.
OrthoDBiEOG7FR7GT.
PhylomeDBiQ19986.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 4 hits.
[Graphical view]
SMARTiSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS50082. WD_REPEATS_2. 2 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q19986-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKCPTVRAR AIDCKQGAVR AVRYNVDGNY CVTCGSDKTV KLWNPLKSSL
60 70 80 90 100
LKTYSGTGNE VLDAASSSDN SQIAAGGADR ACTVFDVETG KQLRRWRTHG
110 120 130 140 150
AQVNAVAFNE ESSVVFSGSM DCTMQAFDCR SRSEKPIQIF NESTDGILSI
160 170 180 190 200
DVNGHEIVAG SADGNYRVYS IRDGNMTVDY MGDSVNSVSF TPDSNCLLAG
210 220 230 240 250
VMGGIVRLID KSSGKLLASY KGHQNTEYKL DCRVLQSIEH VASGSEDGFV
260 270 280 290 300
YVYSLLDSHI VSKLEHPSKV IHSLTAHPKK ERLMTAAGQM IYLWVAEDDA

EVLGE
Length:305
Mass (Da):33,117
Last modified:June 1, 2001 - v2
Checksum:i70B7BB281EECF462
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD65791.1.
RefSeqiNP_494926.1. NM_062525.4.
UniGeneiCel.15249.

Genome annotation databases

EnsemblMetazoaiF33G12.2; F33G12.2; WBGene00018014.
GeneIDi173867.
KEGGicel:CELE_F33G12.2.
UCSCiF33G12.2. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD65791.1.
RefSeqiNP_494926.1. NM_062525.4.
UniGeneiCel.15249.

3D structure databases

ProteinModelPortaliQ19986.
SMRiQ19986. Positions 18-294.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ19986. 1 interaction.
STRINGi6239.F33G12.2.

Proteomic databases

EPDiQ19986.
PaxDbiQ19986.
PRIDEiQ19986.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF33G12.2; F33G12.2; WBGene00018014.
GeneIDi173867.
KEGGicel:CELE_F33G12.2.
UCSCiF33G12.2. c. elegans.

Organism-specific databases

CTDi173867.
WormBaseiF33G12.2; CE27149; WBGene00018014.

Phylogenomic databases

eggNOGiKOG0316. Eukaryota.
ENOG410XRZ0. LUCA.
GeneTreeiENSGT00840000129765.
HOGENOMiHOG000091642.
InParanoidiQ19986.
KOiK13124.
OMAiATNENRI.
OrthoDBiEOG7FR7GT.
PhylomeDBiQ19986.

Enzyme and pathway databases

ReactomeiR-CEL-5674135. MAP2K and MAPK activation.
SignaLinkiQ19986.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 4 hits.
[Graphical view]
SMARTiSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS50082. WD_REPEATS_2. 2 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ19986_CAEEL
AccessioniPrimary (citable) accession number: Q19986
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: June 1, 2001
Last modified: June 8, 2016
This is version 133 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.