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Protein
Submitted name:

THaumatiN family

Gene

thn-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • defense response to Gram-negative bacterium Source: WormBase
  • innate immune response Source: WormBase
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
THaumatiN familyImported
Gene namesi
Name:thn-1Imported
ORF Names:CELE_F28D1.3Imported, F28D1.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiF28D1.3; CE05743; WBGene00009213; thn-1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_500418713620 – 233Sequence analysisAdd BLAST214

Proteomic databases

PaxDbiQ19874.
PeptideAtlasiQ19874.

Expressioni

Gene expression databases

BgeeiWBGene00009213.

Interactioni

Protein-protein interaction databases

STRINGi6239.F28D1.3.

Structurei

3D structure databases

ProteinModelPortaliQ19874.
SMRiQ19874.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IYET. Eukaryota.
ENOG4111KEV. LUCA.
GeneTreeiENSGT00390000012004.
HOGENOMiHOG000238454.
InParanoidiQ19874.
OMAiMLVEPHA.
OrthoDBiEOG091G0JBT.
PhylomeDBiQ19874.

Family and domain databases

Gene3Di2.60.110.10. 1 hit.
InterProiIPR001938. Thaumatin.
[Graphical view]
PfamiPF00314. Thaumatin. 1 hit.
[Graphical view]
PIRSFiPIRSF002703. Thaumatin. 1 hit.
PRINTSiPR00347. THAUMATIN.
SMARTiSM00205. THN. 1 hit.
[Graphical view]
SUPFAMiSSF49870. SSF49870. 1 hit.
PROSITEiPS51367. THAUMATIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q19874-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALIKLTLAV LLLALGAEAR KITIYNKCPF TIWPGILGPG NPSGGGFKLN
60 70 80 90 100
AGQSRDINVD DAWTAGRVWA RTGCDGNFNC ETGFCRNSEQ CNGAGGVPPA
110 120 130 140 150
SLAEFTLKAW GGQDFYDVSL VDGYNLPVLI DPHGGSGCKR AGGCVKDINA
160 170 180 190 200
ECPAALSVKG HNGKTVACKS GCLGYNTDQE CCRGAYGTPD KCHRSATAQM
210 220 230
FKDACPTAYS YAYDDGSSTF TCQPSASYTV QFC
Length:233
Mass (Da):24,516
Last modified:November 1, 1996 - v1
Checksum:iF1E9B8ADD4C20F64
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAA94598.1.
PIRiT21494.
RefSeqiNP_502360.1. NM_069959.1.
UniGeneiCel.13062.

Genome annotation databases

EnsemblMetazoaiF28D1.3; F28D1.3; WBGene00009213.
GeneIDi185060.
KEGGicel:CELE_F28D1.3.
UCSCiF28D1.3. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAA94598.1.
PIRiT21494.
RefSeqiNP_502360.1. NM_069959.1.
UniGeneiCel.13062.

3D structure databases

ProteinModelPortaliQ19874.
SMRiQ19874.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F28D1.3.

Proteomic databases

PaxDbiQ19874.
PeptideAtlasiQ19874.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF28D1.3; F28D1.3; WBGene00009213.
GeneIDi185060.
KEGGicel:CELE_F28D1.3.
UCSCiF28D1.3. c. elegans.

Organism-specific databases

CTDi185060.
WormBaseiF28D1.3; CE05743; WBGene00009213; thn-1.

Phylogenomic databases

eggNOGiENOG410IYET. Eukaryota.
ENOG4111KEV. LUCA.
GeneTreeiENSGT00390000012004.
HOGENOMiHOG000238454.
InParanoidiQ19874.
OMAiMLVEPHA.
OrthoDBiEOG091G0JBT.
PhylomeDBiQ19874.

Gene expression databases

BgeeiWBGene00009213.

Family and domain databases

Gene3Di2.60.110.10. 1 hit.
InterProiIPR001938. Thaumatin.
[Graphical view]
PfamiPF00314. Thaumatin. 1 hit.
[Graphical view]
PIRSFiPIRSF002703. Thaumatin. 1 hit.
PRINTSiPR00347. THAUMATIN.
SMARTiSM00205. THN. 1 hit.
[Graphical view]
SUPFAMiSSF49870. SSF49870. 1 hit.
PROSITEiPS51367. THAUMATIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ19874_CAEEL
AccessioniPrimary (citable) accession number: Q19874
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 30, 2016
This is version 105 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.