Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Uncharacterized protein

Gene

CELE_F25D1.5

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei93 – 931NADP; via carbonyl oxygenCombined sources
Binding sitei160 – 1601NADPCombined sources
Binding sitei164 – 1641NADPCombined sources

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi13 – 186NADPCombined sources
Nucleotide bindingi38 – 425NADPCombined sources
Nucleotide bindingi66 – 672NADPCombined sources
Nucleotide bindingi193 – 1975NADPCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

NADPCombined sources, Nucleotide-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_F25D1.5Imported, F25D1.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiF25D1.5; CE05726; WBGene00009110.

PTM / Processingi

Proteomic databases

EPDiQ19774.
PaxDbiQ19774.
PRIDEiQ19774.

Interactioni

Protein-protein interaction databases

DIPiDIP-24959N.
IntActiQ19774. 5 interactions.
MINTiMINT-1115844.
STRINGi6239.F25D1.5.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1XHLX-ray2.40A/B1-277[»]
ProteinModelPortaliQ19774.
SMRiQ19774. Positions 3-276.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ19774.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG0725. Eukaryota.
COG1028. LUCA.
GeneTreeiENSGT00760000118868.
InParanoidiQ19774.
OMAiGMIERKD.
OrthoDBiEOG7Q5HJ4.
PhylomeDBiQ19774.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
PROSITEiPS00061. ADH_SHORT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q19774-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARFSGKSVI ITGSSNGIGR SAAVIFAKEG AQVTITGRNE DRLEETKQQI
60 70 80 90 100
LKAGVPAEKI NAVVADVTEA SGQDDIINTT LAKFGKIDIL VNNAGANLAD
110 120 130 140 150
GTANTDQPVE LYQKTFKLNF QAVIEMTQKT KEHLIKTKGE IVNVSSIVAG
160 170 180 190 200
PQAHSGYPYY ACAKAALDQY TRCTAIDLIQ HGVRVNSVSP GAVATGFMGA
210 220 230 240 250
MGLPETASDK LYSFIGSRKE CIPVGHCGKP EEIANIIVFL ADRNLSSYII
260 270
GQSIVADGGS TLVMGMQTHD LMSVLSQ
Length:277
Mass (Da):29,352
Last modified:November 1, 1996 - v1
Checksum:i8993A0AE6324E1D1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAA98264.1.
PIRiT21330.
RefSeqiNP_505704.1. NM_073303.4.
UniGeneiCel.3904.

Genome annotation databases

EnsemblMetazoaiF25D1.5; F25D1.5; WBGene00009110.
GeneIDi184922.
KEGGicel:CELE_F25D1.5.
UCSCiF25D1.5. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAA98264.1.
PIRiT21330.
RefSeqiNP_505704.1. NM_073303.4.
UniGeneiCel.3904.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1XHLX-ray2.40A/B1-277[»]
ProteinModelPortaliQ19774.
SMRiQ19774. Positions 3-276.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-24959N.
IntActiQ19774. 5 interactions.
MINTiMINT-1115844.
STRINGi6239.F25D1.5.

Proteomic databases

EPDiQ19774.
PaxDbiQ19774.
PRIDEiQ19774.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF25D1.5; F25D1.5; WBGene00009110.
GeneIDi184922.
KEGGicel:CELE_F25D1.5.
UCSCiF25D1.5. c. elegans.

Organism-specific databases

CTDi184922.
WormBaseiF25D1.5; CE05726; WBGene00009110.

Phylogenomic databases

eggNOGiKOG0725. Eukaryota.
COG1028. LUCA.
GeneTreeiENSGT00760000118868.
InParanoidiQ19774.
OMAiGMIERKD.
OrthoDBiEOG7Q5HJ4.
PhylomeDBiQ19774.

Miscellaneous databases

EvolutionaryTraceiQ19774.
NextBioi926422.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
PROSITEiPS00061. ADH_SHORT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.
  2. "Crystal Structure of putative Tropinone Reductase-II from Caenorhabditis Elegans with Cofactor and Substrate."
    Schormann N., Karpova E., Zhou J., Zhang Y., Symersky J., Bunzel R., Huang W.-Y., Arabshahi A., Qiu S., Luan C.-H., Gray R., Carson M., Tsao J., Luo M., Johnson D., Lu S., Lin G., Luo D.
    , Cao Z., Li S., McKInstry A., Shang Q., Chen Y.-J., Bray T., Nagy L., DeLucas L.
    Submitted (SEP-2004) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.40 ANGSTROMS) IN COMPLEX WITH NADP.

Entry informationi

Entry nameiQ19774_CAEEL
AccessioniPrimary (citable) accession number: Q19774
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 122 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.