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Protein
Submitted name:

CHp/Wrch Rho-like protein homolog

Gene

chw-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

  • establishment or maintenance of cell polarity Source: WormBase
  • protein transport Source: InterPro
  • small GTPase mediated signal transduction Source: InterPro
  • vulval development Source: WormBase
Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-CEL-194840. Rho GTPase cycle.

Names & Taxonomyi

Protein namesi
Submitted name:
CHp/Wrch Rho-like protein homologImported
Gene namesi
Name:chw-1Imported
ORF Names:CELE_F22E12.2Imported, F22E12.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiF22E12.2; CE05696; WBGene00009059; chw-1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ19739.

Interactioni

Protein-protein interaction databases

DIPiDIP-26677N.
IntActiQ19739. 1 interaction.
MINTiMINT-1045635.
STRINGi6239.F22E12.2.

Structurei

3D structure databases

ProteinModelPortaliQ19739.
SMRiQ19739. Positions 10-174.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG0393. Eukaryota.
COG1100. LUCA.
GeneTreeiENSGT00760000118978.
HOGENOMiHOG000233974.
InParanoidiQ19739.
KOiK07865.
OMAiDCAMEIG.
OrthoDBiEOG757D2C.
PhylomeDBiQ19739.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
[Graphical view]
PfamiPF00071. Ras. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q19739-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKEEDEKCL KCIFVGNAAV GKTSMIVSYT TNVYPHNYVP TAFDNFSVVV
60 70 80 90 100
LVDKKPIRLQ LHDTAGQSSF DTLRPLCYTD ADVFVIVYSV VDLQSFEDVS
110 120 130 140 150
HHWYPEVTKR NPGTKLILVG TQADQRWQVR GNTVTQLRGK ALADRLGAEF
160 170 180 190 200
FECSALTQHN LKQMFDAAIL AGLEGKKNRE KRSNFYTKSS KIKERVARFI

TRTRNLI
Length:207
Mass (Da):23,498
Last modified:November 1, 1996 - v1
Checksum:iEE552530859F97C6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAA94890.1.
PIRiT21273.
RefSeqiNP_505686.1. NM_073285.1.
UniGeneiCel.3932.

Genome annotation databases

EnsemblMetazoaiF22E12.2; F22E12.2; WBGene00009059.
GeneIDi184848.
KEGGicel:CELE_F22E12.2.
UCSCiF22E12.2. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAA94890.1.
PIRiT21273.
RefSeqiNP_505686.1. NM_073285.1.
UniGeneiCel.3932.

3D structure databases

ProteinModelPortaliQ19739.
SMRiQ19739. Positions 10-174.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-26677N.
IntActiQ19739. 1 interaction.
MINTiMINT-1045635.
STRINGi6239.F22E12.2.

Proteomic databases

PaxDbiQ19739.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF22E12.2; F22E12.2; WBGene00009059.
GeneIDi184848.
KEGGicel:CELE_F22E12.2.
UCSCiF22E12.2. c. elegans.

Organism-specific databases

CTDi184848.
WormBaseiF22E12.2; CE05696; WBGene00009059; chw-1.

Phylogenomic databases

eggNOGiKOG0393. Eukaryota.
COG1100. LUCA.
GeneTreeiENSGT00760000118978.
HOGENOMiHOG000233974.
InParanoidiQ19739.
KOiK07865.
OMAiDCAMEIG.
OrthoDBiEOG757D2C.
PhylomeDBiQ19739.

Enzyme and pathway databases

ReactomeiR-CEL-194840. Rho GTPase cycle.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
[Graphical view]
PfamiPF00071. Ras. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ19739_CAEEL
AccessioniPrimary (citable) accession number: Q19739
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 8, 2016
This is version 123 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.