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Q196V9 (RNC_IIV3) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length333 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endonucleolytic cleavage to 5'-phosphomonoester.

Sequence similarities

Belongs to the IIV-6 142R family.

Contains 1 DRBM (double-stranded RNA-binding) domain.

Contains 1 RNase III domain.

Ontologies

Keywords
   LigandRNA-binding
   Molecular functionEndonuclease
Hydrolase
Nuclease
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processRNA processing

Inferred from electronic annotation. Source: InterPro

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

ribonuclease III activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 333333Putative ribonuclease 3
PRO_0000376953

Regions

Domain81 – 208128RNase III
Domain250 – 31970DRBM

Sequences

Sequence LengthMass (Da)Tools
Q196V9 [UniParc].

Last modified July 11, 2006. Version 1.
Checksum: 721A2F2A2FD5B4C8

FASTA33338,408
        10         20         30         40         50         60 
MLVCTNRPPV SPVLQLCRFA SNVVLFHLKI VKQIKFEFLN VFNLKIKRLQ METEVYYGPR 

        70         80         90        100        110        120 
DDSFKDFLIK IFKLMDMGST RSETSNFLNT YINEETLPYF NMAFTSSSAN ELNNYELFEQ 

       130        140        150        160        170        180 
MGDSTIGKFI VWSSYEKFPQ LRGKPEAVEI VARMKINLGS KDNLSQIAED LGMWTFISAT 

       190        200        210        220        230        240 
EEARHRLKKK LLEDVFEALI GVTEYIIYEF TDTNYSQPGL AYQLVYSLLL KLFDPYILKI 

       250        260        270        280        290        300 
DYNTLVDSKN RLKGVFDQYK DKLGLQPVYQ SERIVKNDKN VFLSKVYDGN GNFLGEGTAP 

       310        320        330 
LKKEAEKKAS EVAILTLISN GYKKNIPSLY ETL 

« Hide

References

[1]"Genome of invertebrate iridescent virus type 3 (mosquito iridescent virus)."
Delhon G., Tulman E.R., Afonso C.L., Lu Z., Becnel J.J., Moser B.A., Kutish G.F., Rock D.L.
J. Virol. 80:8439-8449(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DQ643392 Genomic DNA. Translation: ABF82131.1.
RefSeqYP_654673.1. NC_008187.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4156245.

Phylogenomic databases

ProtClustDBCLSP2511652.

Family and domain databases

Gene3D1.10.1520.10. 1 hit.
3.30.160.20. 1 hit.
InterProIPR014720. dsRNA-bd_dom.
IPR000999. RNase_III_dom.
[Graphical view]
PfamPF00636. Ribonuclease_3. 1 hit.
[Graphical view]
SMARTSM00358. DSRM. 1 hit.
SM00535. RIBOc. 1 hit.
[Graphical view]
SUPFAMSSF69065. SSF69065. 1 hit.
PROSITEPS50142. RNASE_3_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRNC_IIV3
AccessionPrimary (citable) accession number: Q196V9
Entry history
Integrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: July 11, 2006
Last modified: April 16, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families