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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_F20D6.9

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_F20D6.9Imported, F20D6.9Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiF20D6.9; CE07113; WBGene00017638.

Subcellular locationi

  • Chromosome SAAS annotation
  • Nucleus SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

ChromosomeSAAS annotation, NucleusSAAS annotation

PTM / Processingi

Proteomic databases

PaxDbiQ19649.

Expressioni

Gene expression databases

BgeeiWBGene00017638.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi6239.F20D6.9.

Structurei

3D structure databases

ProteinModelPortaliQ19649.
SMRiQ19649.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 114HistoneInterPro annotationAdd BLAST105

Sequence similaritiesi

Belongs to the histone H3 family.SAAS annotation

Phylogenomic databases

eggNOGiKOG1745. Eukaryota.
COG2036. LUCA.
GeneTreeiENSGT00840000129844.
HOGENOMiHOG000155290.
InParanoidiQ19649.
KOiK11253.
PhylomeDBiQ19649.

Family and domain databases

InterProiView protein in InterPro
IPR009072. Histone-fold.
IPR007125. Histone_H2A/H2B/H3.
IPR000164. Histone_H3/CENP-A.
PANTHERiPTHR11426. PTHR11426. 1 hit.
PfamiView protein in Pfam
PF00125. Histone. 1 hit.
PRINTSiPR00622. HISTONEH3.
SMARTiView protein in SMART
SM00428. H3. 1 hit.
SUPFAMiSSF47113. SSF47113. 1 hit.

Sequencei

Sequence statusi: Complete.

Q19649-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGKKNLSGV CRKSCTQPVR SYPFHSGTVA LREIRKQQQS TELLIPRSRF
60 70 80 90 100
ERLVKELAQD FVTDLIFRKD AIDALQAAVE DYLVELFRLG NLCAIKCKRV
110
TIEADNLKFA RRIRGEDE
Length:118
Mass (Da):13,543
Last modified:November 1, 1996 - v1
Checksum:i304314962143CAC4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD68325.1.
PIRiT16118.
RefSeqiNP_505106.1. NM_072705.1.
UniGeneiCel.29297.

Genome annotation databases

EnsemblMetazoaiF20D6.9; F20D6.9; WBGene00017638.
GeneIDi184727.
KEGGicel:CELE_F20D6.9.
UCSCiF20D6.9. c. elegans.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ19649_CAEEL
AccessioniPrimary (citable) accession number: Q19649
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 5, 2017
This is version 133 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported