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Protein
Submitted name:

ELRR (Extracellular Leucine-Rich Repeat) ONly

Gene

lron-5

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
ELRR (Extracellular Leucine-Rich Repeat) ONlyImported
Gene namesi
Name:lron-5Imported
ORF Names:CELE_F10F2.4Imported, F10F2.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiF10F2.4; CE31471; WBGene00008656; lron-5.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei608 – 633HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 18Sequence analysisAdd BLAST18
ChainiPRO_500418706319 – 656Sequence analysisAdd BLAST638

Proteomic databases

PaxDbiQ19312.

Expressioni

Gene expression databases

BgeeiWBGene00008656.

Interactioni

Protein-protein interaction databases

IntActiQ19312. 1 interactor.
STRINGi6239.F10F2.4.

Structurei

3D structure databases

ProteinModelPortaliQ19312.
SMRiQ19312.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini553 – 602LRRCTInterPro annotationAdd BLAST50

Keywords - Domaini

Leucine-rich repeatSAAS annotation, RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG4641. Eukaryota.
COG4886. LUCA.
GeneTreeiENSGT00900000141478.
HOGENOMiHOG000021358.
InParanoidiQ19312.
OMAiGSWQYPL.
OrthoDBiEOG091G03P6.
PhylomeDBiQ19312.

Family and domain databases

Gene3Di3.80.10.10. 4 hits.
InterProiView protein in InterPro
IPR000483. Cys-rich_flank_reg_C.
IPR001611. Leu-rich_rpt.
IPR003591. Leu-rich_rpt_typical-subtyp.
IPR032675. LRR_dom_sf.
PfamiView protein in Pfam
PF13855. LRR_8. 2 hits.
SMARTiView protein in SMART
SM00369. LRR_TYP. 7 hits.
SM00082. LRRCT. 1 hit.
SUPFAMiSSF52058. SSF52058. 4 hits.
PROSITEiView protein in PROSITE
PS51450. LRR. 9 hits.

Sequencei

Sequence statusi: Complete.

Q19312-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHILIILLFT SIISSIQADL CAHCDCDFIS HTVVCNRPSL LIRTVSMLPT
60 70 80 90 100
IRQLHLNSLN LPQPPHFLFH PNLRVLRMSR CGMHEIPGST FLPLPGLEVI
110 120 130 140 150
DLSNNHLETL PPTVLRSLKF LRVLILSNNR LSNLDQLTWI LAPGVVLEQL
160 170 180 190 200
DLSGNPIAIA TSMTVFPPVR QLFLSDTRME SVNETAIMFK KLPGKCDRDV
210 220 230 240 250
CRHIPIHNLN VSIITTIDFS SNRDLEIDSG ALDVFSNATY VDLSNTRLPV
260 270 280 290 300
GFEEWLERKS RVKSLNISHC QLPLHEDTWT ACGQFLHSLD ISGIGAKRLR
310 320 330 340 350
FSRFCPIRSV FARDNLISSV YIDAVSMESL HLERNMFSEF PIPPPGVELT
360 370 380 390 400
ELHTLGLSHN LMTSLPPHAL QSYPNLQHFD VSSNQLSEID PQAFPSIGLG
410 420 430 440 450
LISLDLSSNQ LSSLPHPILP SLLLLDLSFN TISHLDPHFF TGLPMLQQLR
460 470 480 490 500
IASNPTLFSR CPNRDSPCWS DHLDELTSLV DLDISNSGLE FSLHWRHLRT
510 520 530 540 550
LKSLILRGNE IRIIDSKSLP ENLRTLDLGE NRVQFTSNFS KLEHLRDLRV
560 570 580 590 600
DQNPLRCDCS LYDIVPHLLN QSQISDPLLY YCFSGSWQYP LLPYLASVKP
610 620 630 640 650
CVDTTRNFYS ILITTFIIAF AIVAGLIGGF LVYRKYADRA NFVYKRISLM

ESPVRL
Length:656
Mass (Da):74,172
Last modified:October 1, 2002 - v2
Checksum:i4C8DBB2407AB90FD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA. Translation: CAA84651.2.
PIRiT20713.
RefSeqiNP_497943.2. NM_065542.4.
UniGeneiCel.19968.

Genome annotation databases

EnsemblMetazoaiF10F2.4; F10F2.4; WBGene00008656.
GeneIDi184307.
KEGGicel:CELE_F10F2.4.
UCSCiF10F2.4. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiQ19312_CAEEL
AccessioniPrimary (citable) accession number: Q19312
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: October 1, 2002
Last modified: November 22, 2017
This is version 128 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported