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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_F08H9.4

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

  • response to topologically incorrect protein Source: WormBase
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_F08H9.4Imported, F08H9.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiF08H9.4a; CE09268; WBGene00008592.

PTM / Processingi

Proteomic databases

PaxDbiQ19228.

Expressioni

Gene expression databases

ExpressionAtlasiQ19228. baseline.

Interactioni

Protein-protein interaction databases

IntActiQ19228. 1 interaction.
STRINGi6239.F08H9.4.

Structurei

3D structure databases

ProteinModelPortaliQ19228.
SMRiQ19228. Positions 5-136.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini44 – 12582HSP20InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the small heat shock protein (HSP20) family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3591. Eukaryota.
ENOG410YERS. LUCA.
GeneTreeiENSGT00760000119238.
HOGENOMiHOG000233954.
InParanoidiQ19228.
OMAiENEHGAS.
OrthoDBiEOG7WHHBK.
PhylomeDBiQ19228.

Family and domain databases

Gene3Di2.60.40.790. 1 hit.
InterProiIPR002068. A-crystallin/Hsp20_dom.
IPR001436. Alpha-crystallin/HSP.
IPR031107. HSP20.
IPR008978. HSP20-like_chaperone.
[Graphical view]
PANTHERiPTHR11527. PTHR11527. 1 hit.
PfamiPF00011. HSP20. 1 hit.
[Graphical view]
PRINTSiPR00299. ACRYSTALLIN.
SUPFAMiSSF49764. SSF49764. 1 hit.
PROSITEiPS01031. HSP20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q19228-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVSPFFNPK RDSQLGEMMR DMGGMQRRLM PISGTFNPMT DDSEIMNSND
60 70 80 90 100
KFAVNLNVSN FKPEELKVNL EGRQLSIQGE HDVENEHGAS RKSFSRMILL
110 120 130 140
PEDVDITSVA TNLSNDGKLC IEAPKLEGVC GRSVPVKEAS MDHHHIE
Length:147
Mass (Da):16,419
Last modified:November 1, 1996 - v1
Checksum:i16C4435076C2EB4E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB01147.1.
PIRiT20616.
RefSeqiNP_506586.1. NM_074185.1.
UniGeneiCel.4211.

Genome annotation databases

EnsemblMetazoaiF08H9.4a; F08H9.4a; WBGene00008592.
GeneIDi184215.
KEGGicel:CELE_F08H9.4.
UCSCiF08H9.4. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB01147.1.
PIRiT20616.
RefSeqiNP_506586.1. NM_074185.1.
UniGeneiCel.4211.

3D structure databases

ProteinModelPortaliQ19228.
SMRiQ19228. Positions 5-136.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ19228. 1 interaction.
STRINGi6239.F08H9.4.

Proteomic databases

PaxDbiQ19228.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF08H9.4a; F08H9.4a; WBGene00008592.
GeneIDi184215.
KEGGicel:CELE_F08H9.4.
UCSCiF08H9.4. c. elegans.

Organism-specific databases

CTDi184215.
WormBaseiF08H9.4a; CE09268; WBGene00008592.

Phylogenomic databases

eggNOGiKOG3591. Eukaryota.
ENOG410YERS. LUCA.
GeneTreeiENSGT00760000119238.
HOGENOMiHOG000233954.
InParanoidiQ19228.
OMAiENEHGAS.
OrthoDBiEOG7WHHBK.
PhylomeDBiQ19228.

Gene expression databases

ExpressionAtlasiQ19228. baseline.

Family and domain databases

Gene3Di2.60.40.790. 1 hit.
InterProiIPR002068. A-crystallin/Hsp20_dom.
IPR001436. Alpha-crystallin/HSP.
IPR031107. HSP20.
IPR008978. HSP20-like_chaperone.
[Graphical view]
PANTHERiPTHR11527. PTHR11527. 1 hit.
PfamiPF00011. HSP20. 1 hit.
[Graphical view]
PRINTSiPR00299. ACRYSTALLIN.
SUPFAMiSSF49764. SSF49764. 1 hit.
PROSITEiPS01031. HSP20. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ19228_CAEEL
AccessioniPrimary (citable) accession number: Q19228
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 8, 2016
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.