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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_F08G12.2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

ReactomeiR-CEL-72163. mRNA Splicing - Major Pathway.
R-CEL-72165. mRNA Splicing - Minor Pathway.
SignaLinkiQ19211.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_F08G12.2Imported, F08G12.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiF08G12.2; CE18578; WBGene00008586.

PTM / Processingi

Proteomic databases

EPDiQ19211.
PaxDbiQ19211.
PRIDEiQ19211.

Interactioni

Protein-protein interaction databases

DIPiDIP-25377N.
IntActiQ19211. 3 interactions.
MINTiMINT-1067612.
STRINGi6239.F08G12.2.

Structurei

3D structure databases

ProteinModelPortaliQ19211.
SMRiQ19211. Positions 10-329.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini34 – 331298WD_REPEATS_REGIONInterPro annotationAdd
BLAST

Keywords - Domaini

RepeatUniRule annotation, WD repeatUniRule annotation

Phylogenomic databases

eggNOGiKOG0265. Eukaryota.
ENOG410XSEW. LUCA.
GeneTreeiENSGT00810000125363.
HOGENOMiHOG000091644.
InParanoidiQ19211.
KOiK12857.
OMAiDDESTIF.
OrthoDBiEOG7992QT.
PhylomeDBiQ19211.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 7 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 4 hits.
PS50082. WD_REPEATS_2. 5 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q19211-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALVTSSGQQ LVSSGFPQQT AQRFSNLMAP TMVLLGHEGE IYTGAFSPDG
60 70 80 90 100
TCLATSGYDQ KIFFWNVYGE CENFSTIKGH SGAVMDLKFT TDSSSLVSCG
110 120 130 140 150
TDKSVRVWDM ETGTCARRFR THTDFVNAVH PSRRGVTLVA SASDDGTCRV
160 170 180 190 200
HDMRTKEPVK TYTNRYQQTA VTFNDSSDQV ISGGIDNVLK VWDMRRDEIT
210 220 230 240 250
YTLTGHRDTI TGISLSPSGK FIISNSMDCT VRQWDIRPFV PGQRSVGVFA
260 270 280 290 300
GHNHNFEKNL LKCSWSPCER FITAGSSDRF LYVWETLSKK IVYKLPGHMG
310 320 330
SVNCTDFHPK EPIMLSCGSD KRVFLGEIDM S
Length:331
Mass (Da):36,822
Last modified:November 1, 1998 - v2
Checksum:iE537B19EC9180F91
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CAA91460.1.
PIRiT20593.
RefSeqiNP_509886.1. NM_077485.5.
UniGeneiCel.11041.

Genome annotation databases

EnsemblMetazoaiF08G12.2; F08G12.2; WBGene00008586.
GeneIDi181319.
KEGGicel:CELE_F08G12.2.
UCSCiF08G12.2. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CAA91460.1.
PIRiT20593.
RefSeqiNP_509886.1. NM_077485.5.
UniGeneiCel.11041.

3D structure databases

ProteinModelPortaliQ19211.
SMRiQ19211. Positions 10-329.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-25377N.
IntActiQ19211. 3 interactions.
MINTiMINT-1067612.
STRINGi6239.F08G12.2.

Proteomic databases

EPDiQ19211.
PaxDbiQ19211.
PRIDEiQ19211.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF08G12.2; F08G12.2; WBGene00008586.
GeneIDi181319.
KEGGicel:CELE_F08G12.2.
UCSCiF08G12.2. c. elegans.

Organism-specific databases

CTDi181319.
WormBaseiF08G12.2; CE18578; WBGene00008586.

Phylogenomic databases

eggNOGiKOG0265. Eukaryota.
ENOG410XSEW. LUCA.
GeneTreeiENSGT00810000125363.
HOGENOMiHOG000091644.
InParanoidiQ19211.
KOiK12857.
OMAiDDESTIF.
OrthoDBiEOG7992QT.
PhylomeDBiQ19211.

Enzyme and pathway databases

ReactomeiR-CEL-72163. mRNA Splicing - Major Pathway.
R-CEL-72165. mRNA Splicing - Minor Pathway.
SignaLinkiQ19211.

Miscellaneous databases

NextBioi913432.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 7 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 4 hits.
PS50082. WD_REPEATS_2. 5 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ19211_CAEEL
AccessioniPrimary (citable) accession number: Q19211
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1998
Last modified: May 11, 2016
This is version 134 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.