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Q18FC1

- SYR_HALWD

UniProt

Q18FC1 - SYR_HALWD

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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Haloquadratum walsbyi (strain DSM 16790 / HBSQ001)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

  1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
  2. ATP binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciHWAL362976:GJSR-2357-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
Alternative name(s):
Arginyl-tRNA synthetaseUniRule annotation
Short name:
ArgRSUniRule annotation
Gene namesi
Name:argSUniRule annotation
Ordered Locus Names:HQ_3239A
OrganismiHaloquadratum walsbyi (strain DSM 16790 / HBSQ001)
Taxonomic identifieri362976 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHaloquadratum
ProteomesiUP000001975: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 596596Arginine--tRNA ligasePRO_1000018039Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi362976.HQ3239A.

Structurei

3D structure databases

ProteinModelPortaliQ18FC1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi127 – 13711"HIGH" regionAdd
BLAST

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0018.
HOGENOMiHOG000247213.
KOiK01887.
OMAiFDYESSD.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPiMF_00123. Arg_tRNA_synth.
InterProiIPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSiPR01038. TRNASYNTHARG.
SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.

Sequencei

Sequence statusi: Complete.

Q18FC1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFRPFRSEVE HAVESALQTL ALPTDDLGVE TPPEDVPATL ASSVAFRLAR
60 70 80 90 100
SAKDSPPRVA DDIAAAIDLE PDSQTYEYID HVDTRGPYIN FHVNDAYYMD
110 120 130 140 150
TLTAAQDPGY GHLPNTGQSV VVEHTSANPT GPVHVGRGRN TIFGDAVARL
160 170 180 190 200
LEYNGDTVDR HYYLNDAGRQ VGVFTWAYEK FDADSLPDPE RDRPDYDLVR
210 220 230 240 250
YYRRGNEFLE NADADAVESA EDEIASIING LEAGNTETYE RVQTVVDQVI
260 270 280 290 300
DGMQHSFDRL SAIFDEFIKE TRFIQNGDAD AVVERLKSAD CAVYEDDAWQ
310 320 330 340 350
IDLSAYDIEK NLVFLRSDGT TLYTTRDLAH HEWKFDNYDA SVTILGEDHK
360 370 380 390 400
LQAEQLDATL QILGNDTDQL RQPFYSWVNL PEGGMSTRKG TGVDLDDLLD
410 420 430 440 450
EAIARAREEV HDRLGSRVRD DSLSSDDIDR IARQVGVGAV RYDIVSKQPT
460 470 480 490 500
KGITFEWDRA LDFEAQSAPY IQYVHARCCG IETEVNSNTD LDIDALTSDS
510 520 530 540 550
IPDITMLRTD AERALLQEIA RFPAVVESAA ADLEPHVIAT FARSFAEQFN
560 570 580 590
TFYRECSVLN AESEIMTAAR VSLVRAARHT VANALDIVGV EAPQSM
Length:596
Mass (Da):66,431
Last modified:July 25, 2006 - v1
Checksum:iE71008C8B1183ED6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM180088 Genomic DNA. Translation: CAJ53337.1.
RefSeqiYP_658932.1. NC_008212.1.

Genome annotation databases

EnsemblBacteriaiCAJ53337; CAJ53337; HQ_3239A.
GeneIDi4193716.
KEGGihwa:HQ3239A.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM180088 Genomic DNA. Translation: CAJ53337.1 .
RefSeqi YP_658932.1. NC_008212.1.

3D structure databases

ProteinModelPortali Q18FC1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 362976.HQ3239A.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAJ53337 ; CAJ53337 ; HQ_3239A .
GeneIDi 4193716.
KEGGi hwa:HQ3239A.

Phylogenomic databases

eggNOGi COG0018.
HOGENOMi HOG000247213.
KOi K01887.
OMAi FDYESSD.

Enzyme and pathway databases

BioCyci HWAL362976:GJSR-2357-MONOMER.

Family and domain databases

Gene3Di 1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPi MF_00123. Arg_tRNA_synth.
InterProi IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view ]
PANTHERi PTHR11956. PTHR11956. 1 hit.
Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view ]
PRINTSi PR01038. TRNASYNTHARG.
SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view ]
SUPFAMi SSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsi TIGR00456. argS. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome of the square archaeon Haloquadratum walsbyi: life at the limits of water activity."
    Bolhuis H., Palm P., Wende A., Falb M., Rampp M., Rodriguez-Valera F., Pfeiffer F., Oesterhelt D.
    BMC Genomics 7:169-169(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 16790 / HBSQ001.

Entry informationi

Entry nameiSYR_HALWD
AccessioniPrimary (citable) accession number: Q18FC1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: July 25, 2006
Last modified: October 29, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3