Q18EU8 (IF6_HALWD) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Translation initiation factor 6
Short name=aIF-6

Gene names

Name:	eif6
Ordered Locus Names:	HQ_3422A

Organism

Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) [Complete proteome] [HAMAP]

Taxonomic identifier

362976 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Haloquadratum › Haloquadratum walsbyi

Protein attributes

Sequence length	226 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex By similarity. HAMAP-Rule MF_00032
Sequence similarities	Belongs to the eIF-6 family.

Ontologies

Keywords
Biological process	Protein biosynthesis
Molecular function	Initiation factor
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	mature ribosome assembly Inferred from electronic annotation. Source: InterPro
Molecular_function	ribosome binding Inferred from electronic annotation. Source: InterPro translation initiation factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 226	226	Translation initiation factor 6 HAMAP-Rule MF_00032		PRO_0000259427

Sequences

	Sequence		Length	Mass (Da)
	Q18EU8 [UniParc]. Last modified July 25, 2006. Version 1. Checksum: 8898BC95E5320E7B	FASTA	226	23,284
	10 20 30 40 50 60 MLRASFAGSP YVGVFARATD DVLLLRSDVD DDTADAMAAE LDIPAVATTI GGSGTVGALA 70 80 90 100 110 120 TGNENGILVT SNVTMREKEA IETTASVSVT ELPGRINAAG NVILANDYGA YVHPDLSTEA 130 140 150 160 170 180 VESIESALNV PVARGKLADV RTVGTAAVAT NRGVLCHPKA REPELEAIED HLDVRADIGT 190 200 210 220 VNYGAPLVGS GIVAGQTGYV VGEDTTGPEL TRIEDTLGYL ESITSE

References

[1]

"The genome of the square archaeon Haloquadratum walsbyi: life at the limits of water activity." Bolhuis H., Palm P., Wende A., Falb M., Rampp M., Rodriguez-Valera F., Pfeiffer F., Oesterhelt D. BMC Genomics 7:169-169(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 16790 / HBSQ001.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM180088 Genomic DNA. Translation: CAJ53519.1.
RefSeq	YP_659107.1. NC_008212.1.
3D structure databases
ProteinModelPortal	Q18EU8.
ModBase	Search...
Protein-protein interaction databases
STRING	362976.HQ3422A.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAJ53519; CAJ53519; HQ_3422A.
GeneID	4194787.
KEGG	hwa:HQ3422A.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1976.
HOGENOM	HOG000230604.
KO	K03264.
OMA	QFENSNE.
ProtClustDB	PRK04046.
Enzyme and pathway databases
BioCyc	HWAL362976:GJSR-2557-MONOMER.
Family and domain databases
HAMAP	MF_00032. eIF-6.
InterPro	IPR002769. eIF6. [Graphical view]
PANTHER	PTHR10784. PTHR10784. 1 hit.
Pfam	PF01912. eIF-6. 1 hit. [Graphical view]
PIRSF	PIRSF006413. IF-6. 1 hit.
SMART	SM00654. eIF6. 1 hit. [Graphical view]
TIGRFAMs	TIGR00323. eIF-6. 1 hit.
ProtoNet	Search...

Entry information

Entry name

IF6_HALWD

Accession

Primary (citable) accession number: Q18EU8

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 31, 2006
Last sequence update:	July 25, 2006
Last modified:	May 29, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program