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Q18EU8

- IF6_HALWD

UniProt

Q18EU8 - IF6_HALWD

Protein

Translation initiation factor 6

Gene

eif6

Organism
Haloquadratum walsbyi (strain DSM 16790 / HBSQ001)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (25 Jul 2006)
      Previous versions | rss
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    Functioni

    Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex.UniRule annotation

    GO - Molecular functioni

    1. ribosome binding Source: InterPro
    2. translation initiation factor activity Source: UniProtKB-KW

    GO - Biological processi

    1. mature ribosome assembly Source: InterPro

    Keywords - Molecular functioni

    Initiation factor

    Keywords - Biological processi

    Protein biosynthesis

    Enzyme and pathway databases

    BioCyciHWAL362976:GJSR-2557-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Translation initiation factor 6UniRule annotation
    Short name:
    aIF-6UniRule annotation
    Gene namesi
    Name:eif6UniRule annotation
    Ordered Locus Names:HQ_3422A
    OrganismiHaloquadratum walsbyi (strain DSM 16790 / HBSQ001)
    Taxonomic identifieri362976 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHaloquadratum
    ProteomesiUP000001975: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 226226Translation initiation factor 6PRO_0000259427Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi362976.HQ3422A.

    Structurei

    3D structure databases

    ProteinModelPortaliQ18EU8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the eIF-6 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1976.
    HOGENOMiHOG000230604.
    KOiK03264.
    OMAiWLSDLFK.

    Family and domain databases

    HAMAPiMF_00032. eIF_6.
    InterProiIPR002769. eIF6.
    [Graphical view]
    PANTHERiPTHR10784. PTHR10784. 1 hit.
    PfamiPF01912. eIF-6. 1 hit.
    [Graphical view]
    PIRSFiPIRSF006413. IF-6. 1 hit.
    SMARTiSM00654. eIF6. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00323. eIF-6. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q18EU8-1 [UniParc]FASTAAdd to Basket

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    MLRASFAGSP YVGVFARATD DVLLLRSDVD DDTADAMAAE LDIPAVATTI    50
    GGSGTVGALA TGNENGILVT SNVTMREKEA IETTASVSVT ELPGRINAAG 100
    NVILANDYGA YVHPDLSTEA VESIESALNV PVARGKLADV RTVGTAAVAT 150
    NRGVLCHPKA REPELEAIED HLDVRADIGT VNYGAPLVGS GIVAGQTGYV 200
    VGEDTTGPEL TRIEDTLGYL ESITSE 226
    Length:226
    Mass (Da):23,284
    Last modified:July 25, 2006 - v1
    Checksum:i8898BC95E5320E7B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM180088 Genomic DNA. Translation: CAJ53519.1.
    RefSeqiYP_659107.1. NC_008212.1.

    Genome annotation databases

    EnsemblBacteriaiCAJ53519; CAJ53519; HQ_3422A.
    GeneIDi4194787.
    KEGGihwa:HQ3422A.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM180088 Genomic DNA. Translation: CAJ53519.1 .
    RefSeqi YP_659107.1. NC_008212.1.

    3D structure databases

    ProteinModelPortali Q18EU8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 362976.HQ3422A.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAJ53519 ; CAJ53519 ; HQ_3422A .
    GeneIDi 4194787.
    KEGGi hwa:HQ3422A.

    Phylogenomic databases

    eggNOGi COG1976.
    HOGENOMi HOG000230604.
    KOi K03264.
    OMAi WLSDLFK.

    Enzyme and pathway databases

    BioCyci HWAL362976:GJSR-2557-MONOMER.

    Family and domain databases

    HAMAPi MF_00032. eIF_6.
    InterProi IPR002769. eIF6.
    [Graphical view ]
    PANTHERi PTHR10784. PTHR10784. 1 hit.
    Pfami PF01912. eIF-6. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF006413. IF-6. 1 hit.
    SMARTi SM00654. eIF6. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00323. eIF-6. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome of the square archaeon Haloquadratum walsbyi: life at the limits of water activity."
      Bolhuis H., Palm P., Wende A., Falb M., Rampp M., Rodriguez-Valera F., Pfeiffer F., Oesterhelt D.
      BMC Genomics 7:169-169(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 16790 / HBSQ001.

    Entry informationi

    Entry nameiIF6_HALWD
    AccessioniPrimary (citable) accession number: Q18EU8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 31, 2006
    Last sequence update: July 25, 2006
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Translation initiation factors
      List of translation initiation factor entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3