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Q18EU8 (IF6_HALWD) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Translation initiation factor 6

Short name=aIF-6
Gene names
Name:eif6
Ordered Locus Names:HQ_3422A
OrganismHaloquadratum walsbyi (strain DSM 16790 / HBSQ001) [Complete proteome] [HAMAP]
Taxonomic identifier362976 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHaloquadratum

Protein attributes

Sequence length226 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex By similarity. HAMAP-Rule MF_00032

Sequence similarities

Belongs to the eIF-6 family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Molecular functionInitiation factor
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processmature ribosome assembly

Inferred from electronic annotation. Source: InterPro

   Molecular_functionribosome binding

Inferred from electronic annotation. Source: InterPro

translation initiation factor activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 226226Translation initiation factor 6 HAMAP-Rule MF_00032
PRO_0000259427

Sequences

Sequence LengthMass (Da)Tools
Q18EU8 [UniParc].

Last modified July 25, 2006. Version 1.
Checksum: 8898BC95E5320E7B

FASTA22623,284
        10         20         30         40         50         60 
MLRASFAGSP YVGVFARATD DVLLLRSDVD DDTADAMAAE LDIPAVATTI GGSGTVGALA 

        70         80         90        100        110        120 
TGNENGILVT SNVTMREKEA IETTASVSVT ELPGRINAAG NVILANDYGA YVHPDLSTEA 

       130        140        150        160        170        180 
VESIESALNV PVARGKLADV RTVGTAAVAT NRGVLCHPKA REPELEAIED HLDVRADIGT 

       190        200        210        220 
VNYGAPLVGS GIVAGQTGYV VGEDTTGPEL TRIEDTLGYL ESITSE 

« Hide

References

[1]"The genome of the square archaeon Haloquadratum walsbyi: life at the limits of water activity."
Bolhuis H., Palm P., Wende A., Falb M., Rampp M., Rodriguez-Valera F., Pfeiffer F., Oesterhelt D.
BMC Genomics 7:169-169(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 16790 / HBSQ001.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM180088 Genomic DNA. Translation: CAJ53519.1.
RefSeqYP_659107.1. NC_008212.1.

3D structure databases

ProteinModelPortalQ18EU8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING362976.HQ3422A.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAJ53519; CAJ53519; HQ_3422A.
GeneID4194787.
KEGGhwa:HQ3422A.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1976.
HOGENOMHOG000230604.
KOK03264.
OMANDWCAFT.
ProtClustDBPRK04046.

Enzyme and pathway databases

BioCycHWAL362976:GJSR-2557-MONOMER.

Family and domain databases

HAMAPMF_00032. eIF_6.
InterProIPR002769. eIF6.
[Graphical view]
PANTHERPTHR10784. PTHR10784. 1 hit.
PfamPF01912. eIF-6. 1 hit.
[Graphical view]
PIRSFPIRSF006413. IF-6. 1 hit.
SMARTSM00654. eIF6. 1 hit.
[Graphical view]
TIGRFAMsTIGR00323. eIF-6. 1 hit.
ProtoNetSearch...

Entry information

Entry nameIF6_HALWD
AccessionPrimary (citable) accession number: Q18EU8
Entry history
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: July 25, 2006
Last modified: February 19, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Translation initiation factors

List of translation initiation factor entries