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Protein

Translation initiation factor 6

Gene

eif6

Organism
Haloquadratum walsbyi (strain DSM 16790 / HBSQ001)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionInitiation factor
Biological processProtein biosynthesis

Enzyme and pathway databases

BioCyciHWAL362976:G1G1J-2514-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Translation initiation factor 6UniRule annotation
Short name:
aIF-6UniRule annotation
Gene namesi
Name:eif6UniRule annotation
Ordered Locus Names:HQ_3422A
OrganismiHaloquadratum walsbyi (strain DSM 16790 / HBSQ001)
Taxonomic identifieri362976 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHaloferacalesHaloferacaceaeHaloquadratum
Proteomesi
  • UP000001975 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002594271 – 226Translation initiation factor 6Add BLAST226

Interactioni

Protein-protein interaction databases

STRINGi362976.HQ3422A

Structurei

3D structure databases

ProteinModelPortaliQ18EU8
SMRiQ18EU8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eIF-6 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04176 Archaea
COG1976 LUCA
HOGENOMiHOG000230604
KOiK03264
OMAiNDWCAFT
OrthoDBiPOG093Z0C2O

Family and domain databases

HAMAPiMF_00032 eIF_6, 1 hit
InterProiView protein in InterPro
IPR002769 eIF6
PANTHERiPTHR10784 PTHR10784, 1 hit
PfamiView protein in Pfam
PF01912 eIF-6, 1 hit
PIRSFiPIRSF006413 IF-6, 1 hit
SMARTiView protein in SMART
SM00654 eIF6, 1 hit
TIGRFAMsiTIGR00323 eIF-6, 1 hit

Sequencei

Sequence statusi: Complete.

Q18EU8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRASFAGSP YVGVFARATD DVLLLRSDVD DDTADAMAAE LDIPAVATTI
60 70 80 90 100
GGSGTVGALA TGNENGILVT SNVTMREKEA IETTASVSVT ELPGRINAAG
110 120 130 140 150
NVILANDYGA YVHPDLSTEA VESIESALNV PVARGKLADV RTVGTAAVAT
160 170 180 190 200
NRGVLCHPKA REPELEAIED HLDVRADIGT VNYGAPLVGS GIVAGQTGYV
210 220
VGEDTTGPEL TRIEDTLGYL ESITSE
Length:226
Mass (Da):23,284
Last modified:July 25, 2006 - v1
Checksum:i8898BC95E5320E7B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180088 Genomic DNA Translation: CAJ53519.1
RefSeqiWP_011572616.1, NC_008212.1

Genome annotation databases

EnsemblBacteriaiCAJ53519; CAJ53519; HQ_3422A
GeneIDi4194787
KEGGihwa:HQ_3422A

Similar proteinsi

Entry informationi

Entry nameiIF6_HALWD
AccessioniPrimary (citable) accession number: Q18EU8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: July 25, 2006
Last modified: March 28, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health