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Protein

30S ribosomal protein S6e

Gene

rps6e

Organism
Haloquadratum walsbyi (strain DSM 16790 / HBSQ001)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S6eUniRule annotation
Gene namesi
Name:rps6eUniRule annotation
Ordered Locus Names:HQ_1070A
OrganismiHaloquadratum walsbyi (strain DSM 16790 / HBSQ001)
Taxonomic identifieri362976 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHaloferacalesHaloferacaceaeHaloquadratum
Proteomesi
  • UP000001975 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002586211 – 16130S ribosomal protein S6eAdd BLAST161

Interactioni

Protein-protein interaction databases

STRINGi362976.HQ1070A.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S6e family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01946. Archaea.
COG2125. LUCA.
HOGENOMiHOG000226356.
KOiK02991.
OMAiEQDANRF.

Family and domain databases

HAMAPiMF_00512. Ribosomal_S6e. 1 hit.
InterProiIPR001377. Ribosomal_S6e.
IPR020924. Ribosomal_S6e_arc.
IPR018282. Ribosomal_S6e_CS.
[Graphical view]
PANTHERiPTHR11502. PTHR11502. 1 hit.
PfamiPF01092. Ribosomal_S6e. 1 hit.
[Graphical view]
SMARTiSM01405. Ribosomal_S6e. 1 hit.
[Graphical view]
PROSITEiPS00578. RIBOSOMAL_S6E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q18DP5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEFKVVVSD ETGHTRQFEV DEQDANRFLG RNLGNEVDGN AVGLDGATLE
60 70 80 90 100
LTGGSDDAGR PMREDVSGSD LKELLLEGGV GYEPTRDGER KRITVRGRQV
110 120 130 140 150
SDETAQVNAA VVGETPIAVL LGEEEPEDAD DDGDSDVDAD EATDTDAGSE
160
EDNDDDIADA E
Length:161
Mass (Da):17,100
Last modified:July 25, 2006 - v1
Checksum:i0BE714090699EF24
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180088 Genomic DNA. Translation: CAJ51200.1.
RefSeqiWP_011570367.1. NC_008212.1.

Genome annotation databases

EnsemblBacteriaiCAJ51200; CAJ51200; HQ_1070A.
GeneIDi4194665.
KEGGihwa:HQ_1070A.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180088 Genomic DNA. Translation: CAJ51200.1.
RefSeqiWP_011570367.1. NC_008212.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi362976.HQ1070A.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ51200; CAJ51200; HQ_1070A.
GeneIDi4194665.
KEGGihwa:HQ_1070A.

Phylogenomic databases

eggNOGiarCOG01946. Archaea.
COG2125. LUCA.
HOGENOMiHOG000226356.
KOiK02991.
OMAiEQDANRF.

Family and domain databases

HAMAPiMF_00512. Ribosomal_S6e. 1 hit.
InterProiIPR001377. Ribosomal_S6e.
IPR020924. Ribosomal_S6e_arc.
IPR018282. Ribosomal_S6e_CS.
[Graphical view]
PANTHERiPTHR11502. PTHR11502. 1 hit.
PfamiPF01092. Ribosomal_S6e. 1 hit.
[Graphical view]
SMARTiSM01405. Ribosomal_S6e. 1 hit.
[Graphical view]
PROSITEiPS00578. RIBOSOMAL_S6E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS6E_HALWD
AccessioniPrimary (citable) accession number: Q18DP5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: July 25, 2006
Last modified: November 2, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.