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Protein

50S ribosomal protein L36

Gene

rpmJ

Organism
Peptoclostridium difficile (strain 630) (Clostridium difficile)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciPDIF272563:G12WB-152-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L36UniRule annotation
Gene namesi
Name:rpmJUniRule annotation
Ordered Locus Names:CD630_00941
ORF Names:CD0094A
OrganismiPeptoclostridium difficile (strain 630) (Clostridium difficile)
Taxonomic identifieri272563 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaeClostridioides
Proteomesi
  • UP000001978 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003021831 – 3750S ribosomal protein L36Add BLAST37

Interactioni

Protein-protein interaction databases

STRINGi272563.CD0094A.

Structurei

3D structure databases

ProteinModelPortaliQ18CI1.
SMRiQ18CI1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bL36 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG41067V7. Bacteria.
COG0257. LUCA.
HOGENOMiHOG000111584.
KOiK02919.

Family and domain databases

HAMAPiMF_00251. Ribosomal_L36. 1 hit.
InterProiView protein in InterPro
IPR000473. Ribosomal_L36.
PfamiView protein in Pfam
PF00444. Ribosomal_L36. 1 hit.
SUPFAMiSSF57840. SSF57840. 1 hit.
TIGRFAMsiTIGR01022. rpmJ_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00828. RIBOSOMAL_L36. 1 hit.

Sequencei

Sequence statusi: Complete.

Q18CI1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30 
MKVRPSVKPI CEKCKVIKRK GKVMVICENP KHKQKQG
Length:37
Mass (Da):4,277
Last modified:July 25, 2006 - v1
Checksum:i7F79A9F2C6BF4CF7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ66913.1.
RefSeqiWP_002509257.1. NC_009089.1.
YP_001086562.1. NC_009089.1.

Genome annotation databases

EnsemblBacteriaiCAJ66913; CAJ66913; CD630_00941.
GeneIDi31351588.
4916517.
KEGGicdf:CD630_00941.
pdc:CDIF630_00164.
PATRICifig|272563.120.peg.104.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL36_PEPD6
AccessioniPrimary (citable) accession number: Q18CI1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: July 25, 2006
Last modified: June 7, 2017
This is version 64 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families