Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

30S ribosomal protein S14 type Z

Gene

rpsZ

Organism
Peptoclostridium difficile (strain 630) (Clostridium difficile)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.UniRule annotation

Cofactori

Zn2+UniRule annotationNote: Binds 1 zinc ion per subunit.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi24ZincUniRule annotation1
Metal bindingi27ZincUniRule annotation1
Metal bindingi40ZincUniRule annotation1
Metal bindingi43ZincUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding
LigandMetal-binding, Zinc

Enzyme and pathway databases

BioCyciPDIF272563:G12WB-140-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S14 type ZUniRule annotation
Gene namesi
Name:rpsZUniRule annotation
Synonyms:rpsNUniRule annotation
Ordered Locus Names:CD630_00841
ORF Names:CD0084A
OrganismiPeptoclostridium difficile (strain 630) (Clostridium difficile)
Taxonomic identifieri272563 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaeClostridioides
Proteomesi
  • UP000001978 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002690901 – 6130S ribosomal protein S14 type ZAdd BLAST61

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.UniRule annotation

Protein-protein interaction databases

STRINGi272563.CD0084A.

Structurei

3D structure databases

ProteinModelPortaliQ18CH1.
SMRiQ18CH1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG41082QR. Bacteria.
COG0199. LUCA.
HOGENOMiHOG000039865.
KOiK02954.
OMAiRAYTRCN.

Family and domain databases

HAMAPiMF_01364_B. Ribosomal_S14_2_B. 1 hit.
InterProiView protein in InterPro
IPR001209. Ribosomal_S14.
IPR018271. Ribosomal_S14_CS.
IPR023053. Ribosomal_S14_Z.
PANTHERiPTHR19836. PTHR19836. 1 hit.
PTHR19836:SF24. PTHR19836:SF24. 1 hit.
PfamiView protein in Pfam
PF00253. Ribosomal_S14. 1 hit.
PROSITEiView protein in PROSITE
PS00527. RIBOSOMAL_S14. 1 hit.

Sequencei

Sequence statusi: Complete.

Q18CH1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARKAMVVKQ QRKQKYATRE YTRCTICGRP HSVLKKFGIC RICFRELAYK
60
GQIPGVRKAS W
Length:61
Mass (Da):7,177
Last modified:July 25, 2006 - v1
Checksum:iACE1F53F5CBEFBA6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ66901.1.
RefSeqiWP_003421149.1. NC_009089.1.
YP_001086550.1. NC_009089.1.

Genome annotation databases

EnsemblBacteriaiCAJ66901; CAJ66901; CD630_00841.
GeneIDi31351576.
4915669.
KEGGicdf:CD630_00841.
pdc:CDIF630_00152.
PATRICifig|272563.120.peg.92.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS14Z_PEPD6
AccessioniPrimary (citable) accession number: Q18CH1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: July 25, 2006
Last modified: June 7, 2017
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families