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Protein

30S ribosomal protein S14 type Z

Gene

rpsZ

Organism
Peptoclostridium difficile (strain 630) (Clostridium difficile)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.UniRule annotation

Cofactori

Zn2+UniRule annotationNote: Binds 1 zinc ion per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi24 – 241ZincUniRule annotation
Metal bindingi27 – 271ZincUniRule annotation
Metal bindingi40 – 401ZincUniRule annotation
Metal bindingi43 – 431ZincUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

Metal-binding, RNA-binding, rRNA-binding, Zinc

Enzyme and pathway databases

BioCyciCDIF272563:GJFE-141-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S14 type ZUniRule annotation
Gene namesi
Name:rpsZUniRule annotation
Synonyms:rpsNUniRule annotation
Ordered Locus Names:CD630_00841
ORF Names:CD0084A
OrganismiPeptoclostridium difficile (strain 630) (Clostridium difficile)
Taxonomic identifieri272563 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaePeptoclostridium
Proteomesi
  • UP000001978 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 616130S ribosomal protein S14 type ZPRO_0000269090Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.UniRule annotation

Protein-protein interaction databases

STRINGi272563.CD0084A.

Structurei

3D structure databases

ProteinModelPortaliQ18CH1.
SMRiQ18CH1. Positions 2-61.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S14P family. Zinc-binding S14P subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG41082QR. Bacteria.
COG0199. LUCA.
HOGENOMiHOG000039865.
KOiK02954.
OMAiRAYTRCN.

Family and domain databases

HAMAPiMF_01364_B. Ribosomal_S14_2_B. 1 hit.
InterProiIPR001209. Ribosomal_S14.
IPR018271. Ribosomal_S14_CS.
IPR023053. Ribosomal_S14_Z.
[Graphical view]
PANTHERiPTHR19836. PTHR19836. 1 hit.
PfamiPF00253. Ribosomal_S14. 1 hit.
[Graphical view]
PROSITEiPS00527. RIBOSOMAL_S14. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q18CH1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARKAMVVKQ QRKQKYATRE YTRCTICGRP HSVLKKFGIC RICFRELAYK
60
GQIPGVRKAS W
Length:61
Mass (Da):7,177
Last modified:July 25, 2006 - v1
Checksum:iACE1F53F5CBEFBA6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ66901.1.
RefSeqiWP_003421149.1. NZ_CP010905.1.
YP_001086550.1. NC_009089.1.

Genome annotation databases

EnsemblBacteriaiCAJ66901; CAJ66901; CD630_00841.
GeneIDi4915669.
KEGGicdf:CD630_00841.
pdc:CDIF630_00152.
PATRICi19438311. VBICloDif38397_0097.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ66901.1.
RefSeqiWP_003421149.1. NZ_CP010905.1.
YP_001086550.1. NC_009089.1.

3D structure databases

ProteinModelPortaliQ18CH1.
SMRiQ18CH1. Positions 2-61.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272563.CD0084A.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ66901; CAJ66901; CD630_00841.
GeneIDi4915669.
KEGGicdf:CD630_00841.
pdc:CDIF630_00152.
PATRICi19438311. VBICloDif38397_0097.

Phylogenomic databases

eggNOGiENOG41082QR. Bacteria.
COG0199. LUCA.
HOGENOMiHOG000039865.
KOiK02954.
OMAiRAYTRCN.

Enzyme and pathway databases

BioCyciCDIF272563:GJFE-141-MONOMER.

Family and domain databases

HAMAPiMF_01364_B. Ribosomal_S14_2_B. 1 hit.
InterProiIPR001209. Ribosomal_S14.
IPR018271. Ribosomal_S14_CS.
IPR023053. Ribosomal_S14_Z.
[Graphical view]
PANTHERiPTHR19836. PTHR19836. 1 hit.
PfamiPF00253. Ribosomal_S14. 1 hit.
[Graphical view]
PROSITEiPS00527. RIBOSOMAL_S14. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS14Z_PEPD6
AccessioniPrimary (citable) accession number: Q18CH1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: July 25, 2006
Last modified: September 7, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.