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Protein

30S ribosomal protein S8

Gene

rpsH

Organism
Peptoclostridium difficile (strain 630) (Clostridium difficile)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciPDIF272563:G12WB-141-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S8UniRule annotation
Gene namesi
Name:rpsHUniRule annotation
Ordered Locus Names:CD630_00850
OrganismiPeptoclostridium difficile (strain 630) (Clostridium difficile)
Taxonomic identifieri272563 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaeClostridioides
Proteomesi
  • UP000001978 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002908211 – 13230S ribosomal protein S8Add BLAST132

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.UniRule annotation

Protein-protein interaction databases

STRINGi272563.CD0085

Structurei

3D structure databases

ProteinModelPortaliQ18CH0
SMRiQ18CH0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS8 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UJY Bacteria
COG0096 LUCA
HOGENOMiHOG000204095
KOiK02994
OMAiFDQGYIL

Family and domain databases

HAMAPiMF_01302_B Ribosomal_S8_B, 1 hit
InterProiView protein in InterPro
IPR000630 Ribosomal_S8
IPR035987 Ribosomal_S8_sf
PANTHERiPTHR11758 PTHR11758, 1 hit
PfamiView protein in Pfam
PF00410 Ribosomal_S8, 1 hit
SUPFAMiSSF56047 SSF56047, 1 hit
PROSITEiView protein in PROSITE
PS00053 RIBOSOMAL_S8, 1 hit

Sequencei

Sequence statusi: Complete.

Q18CH0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTMTDPIADM LTRIRNANVV KHETVDVPAS NMKKELARIL LEEGFIRGYD
60 70 80 90 100
VIEDGKQGII RIQLKYGQEG ERVITGLKKI SKPGMRVYAA NHEIPKVLNG
110 120 130
LGISVISTSK GILTDKQARK ENVGGEVICY VW
Length:132
Mass (Da):14,680
Last modified:July 25, 2006 - v1
Checksum:iC8E51B6932B1A710
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA Translation: CAJ66902.1
RefSeqiWP_003421148.1, NZ_CP010905.2
YP_001086551.1, NC_009089.1

Genome annotation databases

EnsemblBacteriaiCAJ66902; CAJ66902; CD630_00850
GeneIDi31351577
4916506
KEGGicdf:CD630_00850
pdc:CDIF630_00153
PATRICifig|272563.120.peg.93

Similar proteinsi

Entry informationi

Entry nameiRS8_PEPD6
AccessioniPrimary (citable) accession number: Q18CH0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 12, 2007
Last sequence update: July 25, 2006
Last modified: April 25, 2018
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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