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Protein

50S ribosomal protein L14

Gene

rplN

Organism
Peptoclostridium difficile (strain 630) (Clostridium difficile)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciCDIF272563:GJFE-138-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L14UniRule annotation
Gene namesi
Name:rplNUniRule annotation
Ordered Locus Names:CD630_00820
OrganismiPeptoclostridium difficile (strain 630) (Clostridium difficile)
Taxonomic identifieri272563 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaePeptoclostridium
Proteomesi
  • UP000001978 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 12212250S ribosomal protein L14PRO_1000055561Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L19. In the 70S ribosome, L14 and L19 interact and together make contacts with the 16S rRNA in bridges B5 and B8.UniRule annotation

Protein-protein interaction databases

STRINGi272563.CD0082.

Structurei

3D structure databases

ProteinModelPortaliQ18CG7.
SMRiQ18CG7. Positions 1-122.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L14P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UNN. Bacteria.
COG0093. LUCA.
HOGENOMiHOG000183702.
KOiK02874.
OMAiLRDKQFM.
OrthoDBiEOG6GBMJ6.

Family and domain databases

Gene3Di2.40.150.20. 1 hit.
HAMAPiMF_01367. Ribosomal_L14.
InterProiIPR000218. Ribosomal_L14P.
IPR005745. Ribosomal_L14P_bac-type.
IPR019972. Ribosomal_L14P_CS.
[Graphical view]
PANTHERiPTHR11761. PTHR11761. 1 hit.
PfamiPF00238. Ribosomal_L14. 1 hit.
[Graphical view]
SMARTiSM01374. Ribosomal_L14. 1 hit.
[Graphical view]
SUPFAMiSSF50193. SSF50193. 1 hit.
TIGRFAMsiTIGR01067. rplN_bact. 1 hit.
PROSITEiPS00049. RIBOSOMAL_L14. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q18CG7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIQQESRLRV ADNSGAKELL CIRVLGGSKR RYGNIGDVIV ATVKSATPGG
60 70 80 90 100
VVKKGKVVKA VIVRSKQGVR RNDGSYISFD ENAAVIIKDD KTPVGTRIFG
110 120
PVARELRDNE FMKIVSLAPE VL
Length:122
Mass (Da):13,237
Last modified:July 25, 2006 - v1
Checksum:iEDD5F32705D354D1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ66898.1.
RefSeqiWP_003421155.1. NZ_CP010905.1.
YP_001086547.1. NC_009089.1.

Genome annotation databases

EnsemblBacteriaiCAJ66898; CAJ66898; CD630_00820.
GeneIDi4915666.
KEGGicdf:CD630_00820.
pdc:CDIF630_00149.
PATRICi19438305. VBICloDif38397_0094.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ66898.1.
RefSeqiWP_003421155.1. NZ_CP010905.1.
YP_001086547.1. NC_009089.1.

3D structure databases

ProteinModelPortaliQ18CG7.
SMRiQ18CG7. Positions 1-122.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272563.CD0082.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ66898; CAJ66898; CD630_00820.
GeneIDi4915666.
KEGGicdf:CD630_00820.
pdc:CDIF630_00149.
PATRICi19438305. VBICloDif38397_0094.

Phylogenomic databases

eggNOGiENOG4108UNN. Bacteria.
COG0093. LUCA.
HOGENOMiHOG000183702.
KOiK02874.
OMAiLRDKQFM.
OrthoDBiEOG6GBMJ6.

Enzyme and pathway databases

BioCyciCDIF272563:GJFE-138-MONOMER.

Family and domain databases

Gene3Di2.40.150.20. 1 hit.
HAMAPiMF_01367. Ribosomal_L14.
InterProiIPR000218. Ribosomal_L14P.
IPR005745. Ribosomal_L14P_bac-type.
IPR019972. Ribosomal_L14P_CS.
[Graphical view]
PANTHERiPTHR11761. PTHR11761. 1 hit.
PfamiPF00238. Ribosomal_L14. 1 hit.
[Graphical view]
SMARTiSM01374. Ribosomal_L14. 1 hit.
[Graphical view]
SUPFAMiSSF50193. SSF50193. 1 hit.
TIGRFAMsiTIGR01067. rplN_bact. 1 hit.
PROSITEiPS00049. RIBOSOMAL_L14. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 630.

Entry informationi

Entry nameiRL14_PEPD6
AccessioniPrimary (citable) accession number: Q18CG7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: July 25, 2006
Last modified: May 11, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.