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Protein

50S ribosomal protein L11

Gene

rplK

Organism
Peptoclostridium difficile (strain 630) (Clostridium difficile)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciPDIF272563:G12WB-115-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L11UniRule annotation
Gene namesi
Name:rplKUniRule annotation
Ordered Locus Names:CD630_00610
OrganismiPeptoclostridium difficile (strain 630) (Clostridium difficile)
Taxonomic identifieri272563 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaeClostridioides
Proteomesi
  • UP000001978 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002581401 – 14150S ribosomal protein L11Add BLAST141

Post-translational modificationi

One or more lysine residues are methylated.UniRule annotation

Keywords - PTMi

Methylation

Interactioni

Subunit structurei

Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.UniRule annotation

Protein-protein interaction databases

STRINGi272563.CD0061

Structurei

3D structure databases

ProteinModelPortaliQ18CE5
SMRiQ18CE5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL11 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UIK Bacteria
COG0080 LUCA
HOGENOMiHOG000082123
KOiK02867
OMAiCKQFNAK

Family and domain databases

CDDicd00349 Ribosomal_L11, 1 hit
Gene3Di1.10.10.250, 1 hit
3.30.1550.10, 1 hit
HAMAPiMF_00736 Ribosomal_L11, 1 hit
InterProiView protein in InterPro
IPR000911 Ribosomal_L11/L12
IPR036796 Ribosomal_L11/L12_N_sf
IPR006519 Ribosomal_L11_bac-typ
IPR020783 Ribosomal_L11_C
IPR036769 Ribosomal_L11_C_sf
IPR020784 Ribosomal_L11_N
PANTHERiPTHR11661 PTHR11661, 1 hit
PfamiView protein in Pfam
PF00298 Ribosomal_L11, 1 hit
PF03946 Ribosomal_L11_N, 1 hit
SMARTiView protein in SMART
SM00649 RL11, 1 hit
SUPFAMiSSF46906 SSF46906, 1 hit
SSF54747 SSF54747, 1 hit
TIGRFAMsiTIGR01632 L11_bact, 1 hit

Sequencei

Sequence statusi: Complete.

Q18CE5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKKVIGQIK LQIPAGKATP APPVGPALGQ HGVNIMGFTK EFNAKTADQA
60 70 80 90 100
GMIIPVVITV YQDRSFSFIT KTPPAAVLIK KALNLKSGSG EPNKKKVAKM
110 120 130 140
TSAQVREIAE LKMPDLNAAS VEAAMSMIAG TARSMGVVIE D
Length:141
Mass (Da):14,788
Last modified:July 25, 2006 - v1
Checksum:i789114C503A20074
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA Translation: CAJ66876.1
RefSeqiWP_003421189.1, NZ_CP010905.2
YP_001086525.1, NC_009089.1

Genome annotation databases

EnsemblBacteriaiCAJ66876; CAJ66876; CD630_00610
GeneIDi31351551
4916674
KEGGicdf:CD630_00610
pdc:CDIF630_00126
PATRICifig|272563.120.peg.67

Similar proteinsi

Entry informationi

Entry nameiRL11_PEPD6
AccessioniPrimary (citable) accession number: Q18CE5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: July 25, 2006
Last modified: March 28, 2018
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

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