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Q18B84

- Q18B84_PEPD6

UniProt

Q18B84 - Q18B84_PEPD6

Protein
Submitted name:

Pyrimidine-nucleoside phosphorylase

Gene

pdp

Organism
Peptoclostridium difficile (strain 630) (Clostridium difficile)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (25 Jul 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. phosphorylase activity Source: InterPro
    2. pyrimidine-nucleoside phosphorylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. pyrimidine nucleobase metabolic process Source: InterPro
    2. pyrimidine nucleoside metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosyltransferaseSAAS annotationImported, Transferase

    Enzyme and pathway databases

    BioCyciCDIF272563:GJFE-1390-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pyrimidine-nucleoside phosphorylaseImported (EC:2.4.2.2Imported)
    Gene namesi
    Name:pdpImported
    Ordered Locus Names:CD630_12250Imported
    OrganismiPeptoclostridium difficile (strain 630) (Clostridium difficile)Imported
    Taxonomic identifieri272563 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaePeptoclostridium
    ProteomesiUP000001978: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi272563.CD1225.

    Structurei

    3D structure databases

    ProteinModelPortaliQ18B84.
    SMRiQ18B84. Positions 6-438.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0213.
    HOGENOMiHOG000047312.
    KOiK00756.
    OMAiFINGVRD.
    OrthoDBiEOG61ZTGG.

    Family and domain databases

    Gene3Di3.40.1030.10. 1 hit.
    3.90.1170.30. 1 hit.
    InterProiIPR000312. Glycosyl_Trfase_fam3.
    IPR017459. Glycosyl_Trfase_fam3_N_dom.
    IPR013102. PYNP_C.
    IPR018090. Pyrmidine_PPas_bac/euk.
    IPR000053. Pyrmidine_PPase.
    IPR017872. Pyrmidine_PPase_CS.
    [Graphical view]
    PANTHERiPTHR10515. PTHR10515. 1 hit.
    PfamiPF02885. Glycos_trans_3N. 1 hit.
    PF00591. Glycos_transf_3. 1 hit.
    PF07831. PYNP_C. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000478. TP_PyNP. 1 hit.
    SMARTiSM00941. PYNP_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF47648. SSF47648. 1 hit.
    SSF52418. SSF52418. 1 hit.
    SSF54680. SSF54680. 1 hit.
    TIGRFAMsiTIGR02644. Y_phosphoryl. 1 hit.
    PROSITEiPS00647. THYMID_PHOSPHORYLASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q18B84-1 [UniParc]FASTAAdd to Basket

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    MEISIMRMYD IIKKKRDNLE LSKKEINYFI ENYSKGDIPD YQASALLMSI    50
    YLNKMNKQET VHLTEAMMNS GDMINLSEID GIKVDKHSTG GVGDKTTIAL 100
    IPLVASCGAP VAKMSGRGLG HTGGTIDKLE SIPGFSTEME ISKFIDSVNK 150
    SKIAVCGQSA KVAIADKKIY ALRDVTATVD NISLISSSVM SKKLASGADA 200
    IVLDVKTGDG AFMKTLEESF ELAKSMVDIG TGMNRDTIGI VTDMDEPLGF 250
    AVGNSLEVIE AIETLKGNGP KDLVELCEVL GAYMLVLSKV AHDFEDGVEK 300
    IRESIKSGTA IQKLKEFIEN QGGNKDVVDD YSLFKKSKYK YPVKSTKSGY 350
    ISKIKAEDVG VSAMILGAGR ETKDDILDLS AGIILEKKVG DYVNEGEVLA 400
    YMYYNDEQKL SLAKGRFIDS YSIVDSKIEK NKLIYGIVTK EEIKKF 446
    Length:446
    Mass (Da):48,738
    Last modified:July 25, 2006 - v1
    Checksum:i286324FA5E6E1A2B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM180355 Genomic DNA. Translation: CAJ68079.1.
    RefSeqiWP_003438162.1. NC_009089.1.
    YP_001087718.1. NC_009089.1.

    Genome annotation databases

    EnsemblBacteriaiCAJ68079; CAJ68079; CD630_12250.
    GeneIDi4914867.
    KEGGicdf:CD630_12250.
    PATRICi19440793. VBICloDif38397_1284.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM180355 Genomic DNA. Translation: CAJ68079.1 .
    RefSeqi WP_003438162.1. NC_009089.1.
    YP_001087718.1. NC_009089.1.

    3D structure databases

    ProteinModelPortali Q18B84.
    SMRi Q18B84. Positions 6-438.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272563.CD1225.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAJ68079 ; CAJ68079 ; CD630_12250 .
    GeneIDi 4914867.
    KEGGi cdf:CD630_12250.
    PATRICi 19440793. VBICloDif38397_1284.

    Phylogenomic databases

    eggNOGi COG0213.
    HOGENOMi HOG000047312.
    KOi K00756.
    OMAi FINGVRD.
    OrthoDBi EOG61ZTGG.

    Enzyme and pathway databases

    BioCyci CDIF272563:GJFE-1390-MONOMER.

    Family and domain databases

    Gene3Di 3.40.1030.10. 1 hit.
    3.90.1170.30. 1 hit.
    InterProi IPR000312. Glycosyl_Trfase_fam3.
    IPR017459. Glycosyl_Trfase_fam3_N_dom.
    IPR013102. PYNP_C.
    IPR018090. Pyrmidine_PPas_bac/euk.
    IPR000053. Pyrmidine_PPase.
    IPR017872. Pyrmidine_PPase_CS.
    [Graphical view ]
    PANTHERi PTHR10515. PTHR10515. 1 hit.
    Pfami PF02885. Glycos_trans_3N. 1 hit.
    PF00591. Glycos_transf_3. 1 hit.
    PF07831. PYNP_C. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000478. TP_PyNP. 1 hit.
    SMARTi SM00941. PYNP_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47648. SSF47648. 1 hit.
    SSF52418. SSF52418. 1 hit.
    SSF54680. SSF54680. 1 hit.
    TIGRFAMsi TIGR02644. Y_phosphoryl. 1 hit.
    PROSITEi PS00647. THYMID_PHOSPHORYLASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 630Imported.

    Entry informationi

    Entry nameiQ18B84_PEPD6
    AccessioniPrimary (citable) accession number: Q18B84
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 25, 2006
    Last sequence update: July 25, 2006
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3