Q18B84 (Q18B84_CLOD6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pyrimidine-nucleoside phosphorylase EMBL CAJ68079.1
EC=2.4.2.2 EMBL CAJ68079.1

Gene names

Name:	pdp EMBL CAJ68079.1
Ordered Locus Names:	CD630_12250 EMBL CAJ68079.1

Organism

Clostridium difficile (strain 630) [Complete proteome] [HAMAP] EMBL CAJ68079.1

Taxonomic identifier

272563 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptostreptococcaceae › Clostridium difficile

Protein attributes

Sequence length	446 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosyltransferase SAAS SAAS018090 EMBL CAJ68079.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pyrimidine nucleobase metabolic process Inferred from electronic annotation. Source: InterPro pyrimidine nucleoside metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	phosphorylase activity Inferred from electronic annotation. Source: InterPro pyrimidine-nucleoside phosphorylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q18B84 [UniParc]. Last modified July 25, 2006. Version 1. Checksum: 286324FA5E6E1A2B	FASTA	446	48,738
	10 20 30 40 50 60 MEISIMRMYD IIKKKRDNLE LSKKEINYFI ENYSKGDIPD YQASALLMSI YLNKMNKQET 70 80 90 100 110 120 VHLTEAMMNS GDMINLSEID GIKVDKHSTG GVGDKTTIAL IPLVASCGAP VAKMSGRGLG 130 140 150 160 170 180 HTGGTIDKLE SIPGFSTEME ISKFIDSVNK SKIAVCGQSA KVAIADKKIY ALRDVTATVD 190 200 210 220 230 240 NISLISSSVM SKKLASGADA IVLDVKTGDG AFMKTLEESF ELAKSMVDIG TGMNRDTIGI 250 260 270 280 290 300 VTDMDEPLGF AVGNSLEVIE AIETLKGNGP KDLVELCEVL GAYMLVLSKV AHDFEDGVEK 310 320 330 340 350 360 IRESIKSGTA IQKLKEFIEN QGGNKDVVDD YSLFKKSKYK YPVKSTKSGY ISKIKAEDVG 370 380 390 400 410 420 VSAMILGAGR ETKDDILDLS AGIILEKKVG DYVNEGEVLA YMYYNDEQKL SLAKGRFIDS 430 440 YSIVDSKIEK NKLIYGIVTK EEIKKF

References

[1]

"The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome." Sebaihia M., Wren B.W., Mullany P., Fairweather N.F., Minton N., Stabler R., Thomson N.R., Roberts A.P., Cerdeno-Tarraga A.M., Wang H., Holden M.T.G., Wright A., Churcher C., Quail M.A., Baker S., Bason N., Brooks K., Chillingworth T. , Cronin A., Davis P., Dowd L., Fraser A., Feltwell T., Hance Z., Holroyd S., Jagels K., Moule S., Mungall K., Price C., Rabbinowitsch R., Sharp S., Simmonds M., Steven K., Unwin L., Whithead S., Dupuy B., Dougan G., Barrell B.and.Parkhill.J. Nat. Genet. 38:779-786(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 630 EMBL CAJ68079.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM180355 Genomic DNA. Translation: CAJ68079.1.
RefSeq	YP_001087718.1. NC_009089.1.
3D structure databases
ProteinModelPortal	Q18B84.
SMR	Q18B84. Positions 6-438.
ModBase	Search...
Protein-protein interaction databases
STRING	272563.CD1225.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAJ68079; CAJ68079; CD630_12250.
GeneID	4914867.
KEGG	cdf:CD630_12250.
PATRIC	19440793. VBICloDif38397_1284.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0213.
HOGENOM	HOG000047312.
KO	K00756.
OMA	LMAIYFR.
ProtClustDB	CLSK2534752.
Enzyme and pathway databases
BioCyc	CDIF272563:GJFE-1390-MONOMER.
Family and domain databases
Gene3D	3.40.1030.10. 1 hit. 3.90.1170.30. 1 hit.
InterPro	IPR000312. Glycosyl_Trfase_fam3. IPR017459. Glycosyl_Trfase_fam3_N_dom. IPR013102. PYNP_C. IPR018090. Pyrmidine_PPas_bac/euk. IPR000053. Pyrmidine_PPase. IPR017872. Pyrmidine_PPase_CS. [Graphical view]
PANTHER	PTHR10515. PTHR10515. 1 hit.
Pfam	PF02885. Glycos_trans_3N. 1 hit. PF00591. Glycos_transf_3. 1 hit. PF07831. PYNP_C. 1 hit. [Graphical view]
PIRSF	PIRSF000478. TP_PyNP. 1 hit.
SMART	SM00941. PYNP_C. 1 hit. [Graphical view]
SUPFAM	SSF47648. Glyco_trans_3. 1 hit. SSF52418. Glyco_trans_3. 1 hit. SSF54680. PYNP_C. 1 hit.
TIGRFAMs	TIGR02644. Y_phosphoryl. 1 hit.
PROSITE	PS00647. THYMID_PHOSPHORYLASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q18B84_CLOD6

Accession

Primary (citable) accession number: Q18B84

Entry history

Integrated into UniProtKB/TrEMBL:	July 25, 2006
Last sequence update:	July 25, 2006
Last modified:	May 1, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)