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Q18990 (Q18990_CAEEL) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 115. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:pyr-1 EMBL CAA91059.2 WormBase D2085.1
ORF Names:CELE_D2085.1 EMBL CAA91059.2, D2085.1 WormBase D2085.1
OrganismCaenorhabditis elegans [Reference proteome] EMBL CAA91059.2
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length2198 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequences

Sequence LengthMass (Da)Tools
Q18990 [UniParc].

Last modified February 5, 2008. Version 2.
Checksum: 31CFC62E64D21B1E

FASTA2,198242,582
        10         20         30         40         50         60 
MRATLHLEDG STFVGSIYGA TKSVVGEIVF QTGMVGYVES LTDPSYAKQL LTLTYPLIGN 

        70         80         90        100        110        120 
YGVPSAEILD QFKLPAEFES DRIWPAALIV EKICVDGEHS HWQAVQSLSE WLRKADVPCL 

       130        140        150        160        170        180 
SGIDVRQLVK KIRETGTMKA KLVIESDNAQ NFDYVDVNAE NLVDFVSRKE PVVYGSGDQT 

       190        200        210        220        230        240 
ILAVDCGLKN NQIRCLAKRG FRVKVVPWNH PIDTESDYDG LFLSNGPGDP EICAPLVDRL 

       250        260        270        280        290        300 
AKVIARGDKP IFGICLGHQI LSRAIGAKTY KLKYGNRGHN QPCTHYATGR CYITSQNHGY 

       310        320        330        340        350        360 
AVDPDSLPAD WKALFTNEND KTNEGIVHSS KPFFSVQFHP EHTAGPTDCE FLFDVFADSV 

       370        380        390        400        410        420 
RQAKSGTFMN VDQELTRLMT FTPIYHAKEQ RKVLVLGSGG LTIGQAGEFD YSGAQALKAL 

       430        440        450        460        470        480 
REEGIRTVLI NPNIATVQTS KGFADFTYFL PITKEYVTDV IKKERPTGIL CTFGGQTALN 

       490        500        510        520        530        540 
CAIDLYKDGI FEQYDVQVLG TQINTIMKTE DRDLFNQEIS AIGEKVAPSK AATTMEGAIE 

       550        560        570        580        590        600 
AAEELGYPVL VRAAYALGGL GSGFADNREE LIAIAQQALA HSNQVLVDKS LKGWKEVEYE 

       610        620        630        640        650        660 
VVRDAYDNCI TVCNMENVDP LGIHTGESVV VAPSQTLSDR EYNALRTCAI KVIRHLGIIG 

       670        680        690        700        710        720 
ECNIQYALDP YSLTYYIIEV NARLSRSSAL ASKATGYPLA YVAAKLALGQ HLPVIRNSVT 

       730        740        750        760        770        780 
GTTTACFEPS LDYCVVKIPR WDLGKFARVS TQIGSSMKSV GEVMGIGRCF EEALQKALRM 

       790        800        810        820        830        840 
VSDHADGFSP YTFSRPTTAD DLSKPTDKRM FALARGMYYG DFDVEKAHEL TRIDRWFLFR 

       850        860        870        880        890        900 
MQNIVDIYHR LEKTDVNTVS AELLLEAKQA GFSDRQIAKK IGSNEYTVRE ARFVKGITPC 

       910        920        930        940        950        960 
VKQIDTVAGE WPAQTNYLYT TFNGIENDVS FNMKNAVMVL GSGVYRIGSS VEFDSSCVGC 

       970        980        990       1000       1010       1020 
IRELKALGYS TITVNCNPET VSTDYDICDR LYFEEISFET VLDVYHLEKP KGVILAFGGQ 

      1030       1040       1050       1060       1070       1080 
APNNIAMSLS RAQVKIFGTS PNDIDNAEDR FKFSRKLESL KISQPQWKKS ENMEDAKNFC 

      1090       1100       1110       1120       1130       1140 
AQVGYPCLIR PSYVLSGAAM NVAHNAEDLE VFLKQAAVVA KEHPVVVSKF INEAKELDVD 

      1150       1160       1170       1180       1190       1200 
AVALDGKLVV MAVSEHIENA GVHSGDATLV TPAQDMNKLT LDRIKDITFR IAEAFNVNGP 

      1210       1220       1230       1240       1250       1260 
FNMQLIAKNN ELKVIECNLR VSRSFPFVSK TLDYDFVALA TRAMMASDSP AIRATIKPTA 

      1270       1280       1290       1300       1310       1320 
TLLKGKGRVG VKVPQFSFSR LAGADVMLGV EMASTGEVAC FGTSRCDAYL KALLSTGFVV 

      1330       1340       1350       1360       1370       1380 
PKQNIFISIG GYHAKAEMLK SVEALLKLGY ELYGSKGTAD YFQSNKINVK PVDWPFEEGS 

      1390       1400       1410       1420       1430       1440 
SDEKTASGTR SVVEFLENKE FHLVINLPIR GSGAYRVSAF RTHGYKTRRM AIDNGIPLIT 

      1450       1460       1470       1480       1490       1500 
DIKCAKTFIQ ALEMVGKRPT MNSLVDCVTS KSLKRLPGMV DIHVHVREPG ATHKEDWATC 

      1510       1520       1530       1540       1550       1560 
SKAALAGGVT TILAMPNTSP VLVDTDSFYQ TEQLASAKSV VDYALYIGAT PNNSKFAAEF 

      1570       1580       1590       1600       1610       1620 
ADKAAGLKMY LNETFSTLKM DNISDWAKHL SAFPANRPIV CHAEKQTLAA ILCMAQMANR 

      1630       1640       1650       1660       1670       1680 
AVHIAHVATA DEINLVKEAK QRGWNVTCEV CPHHLFLIEE DLPDGIREVR PRLVKPEDRQ 

      1690       1700       1710       1720       1730       1740 
ALWDNMEYID CFATDHAPHT WAEKTGKDGK IPPGFPGVEY MLPLLLTAVH DGKLTMKELT 

      1750       1760       1770       1780       1790       1800 
DRMSTNPRRI FNLPPQDDTY IEVDLNEEWT IPENGGQSKA GWTPFAGRKV FGKVHNVIIR 

      1810       1820       1830       1840       1850       1860 
GEEAVIDGRI VAIPGFGKNV RLYPHSGTAH RGDSDFDQIL EPIPQQMIES SSDEQSPLHT 

      1870       1880       1890       1900       1910       1920 
PPRAHTPIAF PGELLAKNCI SVKHLDKGQI NRIFELADRY KHDVEKGHPL THILNGKVLV 

      1930       1940       1950       1960       1970       1980 
NLFYEVSTRT SCSFSAAMQR LGGSVISVDS QSSSVQKGET LEDTVQVLGS YGDILVLRSN 

      1990       2000       2010       2020       2030       2040 
ENGAADRAAR VCDQPVINGG DGTGEHPTQA LLDVYTIRQE MGTVNGLTIA LVGDLKNGRT 

      2050       2060       2070       2080       2090       2100 
VHSLAKLLCL YKDITLHYVA PSTELEMPQE VLDYVSSKSN FVQKKFTSLA EGINHVDVVY 

      2110       2120       2130       2140       2150       2160 
VTRIQKERFS SPDEYNKVKG SYVINAKLLN EAARDVEEPS SLLVPARSLP IVMHPLPRVD 

      2170       2180       2190 
EIAVELDHDE RAAYFRQAKN GVFVRMSILS LLLGRGHL 

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References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z54284 Genomic DNA. Translation: CAA91059.2.
RefSeqNP_495838.2. NM_063437.4.
UniGeneCel.33265.

3D structure databases

ProteinModelPortalQ18990.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING6239.D2085.1.

Proteomic databases

PaxDbQ18990.
PRIDEQ18990.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaD2085.1; D2085.1; WBGene00004259.
GeneID174385.
KEGGcel:CELE_D2085.1.
UCSCD2085.1. c. elegans.

Organism-specific databases

CTD174385.
WormBaseD2085.1; CE41886; WBGene00004259; pyr-1.

Phylogenomic databases

eggNOGCOG0458.
GeneTreeENSGT00390000015604.
HOGENOMHOG000234584.
InParanoidQ18990.
KOK11540.
OMAYNQLRCF.
OrthoDBEOG7M6D6F.
PhylomeDBQ18990.

Family and domain databases

Gene3D1.10.1030.10. 1 hit.
3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
3.40.50.1370. 2 hits.
3.40.50.1380. 1 hit.
3.40.50.20. 2 hits.
3.40.50.880. 1 hit.
3.50.30.20. 1 hit.
HAMAPMF_00001. Asp_carb_tr.
MF_01209. CPSase_S_chain.
InterProIPR006680. Amidohydro_1.
IPR006132. Asp/Orn_carbamoyltranf_P-bd.
IPR006130. Asp/Orn_carbamoylTrfase.
IPR002082. Asp_carbamoyltransf.
IPR006131. Asp_carbamoyltransf_Asp/Orn-bd.
IPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR006275. CarbamoylP_synth_lsu.
IPR005481. CarbamoylP_synth_lsu_N.
IPR005480. CarbamoylP_synth_lsu_oligo.
IPR006274. CarbamoylP_synth_ssu.
IPR002474. CarbamoylP_synth_ssu_N.
IPR005479. CbamoylP_synth_lsu-like_ATP-bd.
IPR005483. CbamoylP_synth_lsu_CPSase_dom.
IPR029062. Class_I_gatase-like.
IPR002195. Dihydroorotase_CS.
IPR017926. GATASE.
IPR011059. Metal-dep_hydrolase_composite.
IPR011607. MGS-like_dom.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PfamPF01979. Amidohydro_1. 1 hit.
PF00289. CPSase_L_chain. 2 hits.
PF02786. CPSase_L_D2. 2 hits.
PF02787. CPSase_L_D3. 1 hit.
PF00988. CPSase_sm_chain. 1 hit.
PF00117. GATase. 1 hit.
PF02142. MGS. 1 hit.
PF00185. OTCace. 1 hit.
PF02729. OTCace_N. 1 hit.
[Graphical view]
PRINTSPR00100. AOTCASE.
PR00101. ATCASE.
PR00098. CPSASE.
SMARTSM01096. CPSase_L_D3. 1 hit.
SM01097. CPSase_sm_chain. 1 hit.
SM00851. MGS. 1 hit.
[Graphical view]
SUPFAMSSF48108. SSF48108. 1 hit.
SSF51338. SSF51338. 1 hit.
SSF52021. SSF52021. 1 hit.
SSF52317. SSF52317. 1 hit.
SSF52335. SSF52335. 1 hit.
SSF52440. SSF52440. 2 hits.
SSF53671. SSF53671. 1 hit.
TIGRFAMsTIGR00670. asp_carb_tr. 1 hit.
TIGR01369. CPSaseII_lrg. 1 hit.
TIGR01368. CPSaseIIsmall. 1 hit.
PROSITEPS50975. ATP_GRASP. 2 hits.
PS00097. CARBAMOYLTRANSFERASE. 1 hit.
PS00866. CPSASE_1. 2 hits.
PS00867. CPSASE_2. 2 hits.
PS00482. DIHYDROOROTASE_1. 1 hit.
PS00483. DIHYDROOROTASE_2. 1 hit.
PS51273. GATASE_TYPE_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio883806.

Entry information

Entry nameQ18990_CAEEL
AccessionPrimary (citable) accession number: Q18990
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: February 5, 2008
Last modified: July 9, 2014
This is version 115 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)