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Protein
Submitted name:

SNAP-1

Gene

snap-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
SNAP-1Imported
Gene namesi
Name:snap-1Imported
ORF Names:CELE_D1014.3Imported, D1014.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiD1014.3; CE38494; WBGene00017016; snap-1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ18921.

Interactioni

Protein-protein interaction databases

STRINGi6239.D1014.3.1.

Structurei

3D structure databases

ProteinModelPortaliQ18921.
SMRiQ18921. Positions 17-292.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG245914.
GeneTreeiENSGT00390000005826.
HOGENOMiHOG000165015.
InParanoidiQ18921.
KOiK15296.
OMAiINCLNRA.
OrthoDBiEOG7FNC80.
PhylomeDBiQ18921.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiIPR000744. NSF_attach.
IPR011990. TPR-like_helical_dom.
[Graphical view]
PANTHERiPTHR13768. PTHR13768. 1 hit.
PRINTSiPR00448. NSFATTACHMNT.

Sequencei

Sequence statusi: Complete.

Q18921-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDNEAKARQ KMAEGRKKLS GGGGFLNRMF GGGGSNAEAA DLFIQGGNLF
60 70 80 90 100
KMAKNWQAAG DAFLEAAEFY AKNGDSKHDC ATQYAEAANC FRKIQPERAV
110 120 130 140 150
QCLEKTSEIY TDMGRFTMAA KNHVSIAELY ETELPDKEQC VKHYQQAADY
160 170 180 190 200
YKGEEQKSSA SKCLVKVAMY SAELEKYSQA IAVFEEIAFF EADHSTLKYA
210 220 230 240 250
AKGHFFQALL CHLCIDPINT QQALQKYENA SPSFTDSREC KFVKELLAAI
260 270 280 290
DEKKEETFTE CVANFDKISR LDNWSTSLLL KVKRTIEGED EDDLR
Length:295
Mass (Da):33,095
Last modified:February 5, 2008 - v3
Checksum:i13385E3D47F310C3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD68312.1.
RefSeqiNP_505099.2. NM_072698.3.
UniGeneiCel.17234.

Genome annotation databases

EnsemblMetazoaiD1014.3.1; D1014.3.1; WBGene00017016.
D1014.3.2; D1014.3.2; WBGene00017016.
GeneIDi179193.
KEGGicel:CELE_D1014.3.
UCSCiD1014.3.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD68312.1.
RefSeqiNP_505099.2. NM_072698.3.
UniGeneiCel.17234.

3D structure databases

ProteinModelPortaliQ18921.
SMRiQ18921. Positions 17-292.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.D1014.3.1.

Proteomic databases

PaxDbiQ18921.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiD1014.3.1; D1014.3.1; WBGene00017016.
D1014.3.2; D1014.3.2; WBGene00017016.
GeneIDi179193.
KEGGicel:CELE_D1014.3.
UCSCiD1014.3.1. c. elegans.

Organism-specific databases

CTDi179193.
WormBaseiD1014.3; CE38494; WBGene00017016; snap-1.

Phylogenomic databases

eggNOGiNOG245914.
GeneTreeiENSGT00390000005826.
HOGENOMiHOG000165015.
InParanoidiQ18921.
KOiK15296.
OMAiINCLNRA.
OrthoDBiEOG7FNC80.
PhylomeDBiQ18921.

Miscellaneous databases

NextBioi904318.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiIPR000744. NSF_attach.
IPR011990. TPR-like_helical_dom.
[Graphical view]
PANTHERiPTHR13768. PTHR13768. 1 hit.
PRINTSiPR00448. NSFATTACHMNT.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ18921_CAEEL
AccessioniPrimary (citable) accession number: Q18921
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: February 5, 2008
Last modified: July 22, 2015
This is version 106 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.