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Protein
Submitted name:

Fatty Acid CoA Synthetase family

Gene

acs-22

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-CEL-804914. Transport of fatty acids.

Names & Taxonomyi

Protein namesi
Submitted name:
Fatty Acid CoA Synthetase familyImported
Gene namesi
Name:acs-22Imported
ORF Names:CELE_D1009.1Imported, D1009.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiD1009.1a; CE04285; WBGene00017012; acs-22.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 4029HelicalSequence analysisAdd
BLAST
Transmembranei293 – 31523HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

  • endoplasmic reticulum Source: WormBase
  • integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

EPDiQ18916.
PaxDbiQ18916.
PRIDEiQ18916.

Expressioni

Gene expression databases

ExpressionAtlasiQ18916. baseline.

Interactioni

Protein-protein interaction databases

STRINGi6239.D1009.1a.

Structurei

3D structure databases

ProteinModelPortaliQ18916.
SMRiQ18916. Positions 63-620.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini88 – 518431AMP-bindingInterPro annotationAdd
BLAST
Domaini527 – 60579AMP-binding_CInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG1179. Eukaryota.
ENOG410XQ8T. LUCA.
GeneTreeiENSGT00550000074420.
HOGENOMiHOG000044189.
InParanoidiQ18916.
KOiK08745.
OMAiGQIWKEF.
OrthoDBiEOG7W6WKB.
PhylomeDBiQ18916.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q18916-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MREMPDSPKF ALVTFVVYAV VLYNVNSVFW KFVFIGYVVF RLLRTDFGRR
60 70 80 90 100
ALATLPRDFA GLKLLISVKS TIRGLFKKDR PIHEIFLNQV KQHPNKVAII
110 120 130 140 150
EIESGRQLTY QELNALANQY ANLYVSEGYK MGDVVALFME NSIDFFAIWL
160 170 180 190 200
GLSKIGVVSA FINSNLKLEP LAHSINVSKC KSCITNINLL PMFKAAREKN
210 220 230 240 250
LISDEIHVFL AGTQVDGRHR SLQQDLHLFS EDEPPVIDGL NFRSVLCYIY
260 270 280 290 300
TSGTTGNPKP AVIKHFRYFW IAMGAGKAFG INKSDVVYIT MPMYHSAAGI
310 320 330 340 350
MGIGSLIAFG STAVIRKKFS ASNFWKDCVK YNVTATQYIG EICRYLLAAN
360 370 380 390 400
PCPEEKQHNV RLMWGNGLRG QIWKEFVGRF GIKKIGELYG STEGNSNIVN
410 420 430 440 450
VDNHVGACGF MPIYPHIGSL YPVRLIKVDR ATGELERDKN GLCVPCVPGE
460 470 480 490 500
TGEMVGVIKE KDILLKFEGY VSEGDTAKKI YRDVFKHGDK VFASGDILHW
510 520 530 540 550
DDLGYLYFVD RCGDTFRWKG ENVSTTEVEG ILQPVMDVED ATVYGVTVGK
560 570 580 590 600
MEGRAGMAGI VVKDGTDVEK FIADITSRLT ENLASYAIPV FIRLCKEVDR
610 620 630 640 650
TGTFKLKKTD LQKQGYDLVA CKGDPIYYWS AAEKSYKPLT DKMQQDIDTG

VYDRI
Length:655
Mass (Da):73,515
Last modified:November 1, 1996 - v1
Checksum:i2AEB3BF7B198D14C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CCD64411.1.
PIRiT15879.
RefSeqiNP_509509.1. NM_077108.3.
UniGeneiCel.18137.

Genome annotation databases

EnsemblMetazoaiD1009.1a; D1009.1a; WBGene00017012.
GeneIDi181138.
KEGGicel:CELE_D1009.1.
UCSCiD1009.1a. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CCD64411.1.
PIRiT15879.
RefSeqiNP_509509.1. NM_077108.3.
UniGeneiCel.18137.

3D structure databases

ProteinModelPortaliQ18916.
SMRiQ18916. Positions 63-620.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.D1009.1a.

Proteomic databases

EPDiQ18916.
PaxDbiQ18916.
PRIDEiQ18916.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiD1009.1a; D1009.1a; WBGene00017012.
GeneIDi181138.
KEGGicel:CELE_D1009.1.
UCSCiD1009.1a. c. elegans.

Organism-specific databases

CTDi181138.
WormBaseiD1009.1a; CE04285; WBGene00017012; acs-22.

Phylogenomic databases

eggNOGiKOG1179. Eukaryota.
ENOG410XQ8T. LUCA.
GeneTreeiENSGT00550000074420.
HOGENOMiHOG000044189.
InParanoidiQ18916.
KOiK08745.
OMAiGQIWKEF.
OrthoDBiEOG7W6WKB.
PhylomeDBiQ18916.

Enzyme and pathway databases

ReactomeiR-CEL-804914. Transport of fatty acids.

Gene expression databases

ExpressionAtlasiQ18916. baseline.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ18916_CAEEL
AccessioniPrimary (citable) accession number: Q18916
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 8, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.