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Protein
Submitted name:

ELRR (Extracellular Leucine-Rich Repeat) ONly

Gene

lron-15

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
ELRR (Extracellular Leucine-Rich Repeat) ONlyImported
Gene namesi
Name:lron-15Imported
ORF Names:C56E6.6Imported, CELE_C56E6.6Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiC56E6.6; CE46222; WBGene00016974; lron-15.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424Sequence analysisAdd
BLAST
Chaini25 – 12751251Sequence analysisPRO_5004186853Add
BLAST

Proteomic databases

EPDiQ18902.
PaxDbiQ18902.
PRIDEiQ18902.

Expressioni

Gene expression databases

BgeeiWBGene00016974.

Interactioni

Protein-protein interaction databases

STRINGi6239.C56E6.6.

Structurei

3D structure databases

ProteinModelPortaliQ18902.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG0619. Eukaryota.
COG4886. LUCA.
GeneTreeiENSGT00760000118777.
HOGENOMiHOG000016920.
InParanoidiQ18902.
OMAiSINMANT.
OrthoDBiEOG091G00XB.

Family and domain databases

Gene3Di3.80.10.10. 5 hits.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR003591. Leu-rich_rpt_typical-subtyp.
[Graphical view]
PfamiPF13855. LRR_8. 11 hits.
[Graphical view]
SMARTiSM00369. LRR_TYP. 28 hits.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 5 hits.
PROSITEiPS51450. LRR. 36 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q18902-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHSKQKIYFS ILLLYFLQNL QVSCLKSHKR TTNDRCSFLG DVHDIWSHCQ
60 70 80 90 100
CISVPSVTAP GIFSQESPIH IMCHHTSSAT VLQLPNSETM KGPPPHIVAL
110 120 130 140 150
SMTDGSMAFV QQDAFKHHDI QTLDFSNNQI QTVNVNAFRG LEMKLTQLDL
160 170 180 190 200
SHNNLSVIPT WALTYLHSLQ ILHLENNRID VLRSNTFDET QLNNLQFLYL
210 220 230 240 250
DNNQLRIIPN LAFNHLRLVV LMLANNRITE IQKMSLPQTL KFLVLRNNLL
260 270 280 290 300
TQIPYVALND LKTLQSIDLE GNNITHLMDT NEVTFESEMK VILRNNKVRR
310 320 330 340 350
LDKHSFRSFR KIRELDISYN QIQTVEDSSF ETVGHMQSLD LSYNRIAYLP
360 370 380 390 400
RGMLKNFAKT LKTLKLAENM IHATPEALRD LRNLTHLNLN GNKLNRIDGD
410 420 430 440 450
VLKGCTDTLV ELFIANNYLE HIPHGVLSGM KQLEHLDISK NKIMSLKKPT
460 470 480 490 500
SLLSITKEET STVRRLNLAG NRINNMSDYL IFEHMPLLTY VDVSFNRIRF
510 520 530 540 550
ISPRVFEKLK NLESLFLQNN QLAHFPSLFR LDKLRHLMLD NNQIQKIDNF
560 570 580 590 600
SLADLPKLQH LSLAGNQLDI ITENMFGSSS SSELKSLNLA HNKIHSISSR
610 620 630 640 650
SFSDLDNLQQ LRLSHNNIRT ITSMTFSNLR NLRYLDLSHN RIIKILPSAL
660 670 680 690 700
YQLPALDVLH LDHNNLNEID RDAFRSFSDL QSLKLSHNAF RRFSCEFLGS
710 720 730 740 750
ISQVHQLDLS SNQINEIDIF CIARGIRKLS LASNSVEKIN RKLLQDATEL
760 770 780 790 800
TSIDISHNGI IDVDSDAFCE CRKLSHIKLS HNYIRNLWKG TFQYQESLHT
810 820 830 840 850
LDISFNDILF LHQGTFGKNN ILQLHVNNNK LSRIPLEALS STMASLHLLD
860 870 880 890 900
LAHNNIKIVD SSQLTSFGNL SILSFANNKV DSIEDGAFEN LLSLKILDLS
910 920 930 940 950
NNPVTSWSPT AFRDLSHSIS SINMANTGLF SMPKFSHRSI QSLNISCNKI
960 970 980 990 1000
YELSEKDLAP LTKVVALDIS HNNLKQISSM AFEPLIHLKQ LNVSANPITH
1010 1020 1030 1040 1050
LTNEHIQQLY KLETLHVSDM PFLLRLPDSH AFGQMNNLKH FFLYNIPDMA
1060 1070 1080 1090 1100
RPYQISSILS NLPPLHTIYV DIKESALDRQ FYTADTRLLR HLVVAGRNLT
1110 1120 1130 1140 1150
KIEVGAFATI RGFRVRIEIH NSSIEEFPSR IFDTLTGISI LSLSLTDNKL
1160 1170 1180 1190 1200
TTFNPFQSTV APAVNQHGTI LHSLELKNNP IKCDCQFKWM DDFIRVTKFL
1210 1220 1230 1240 1250
SDHHISHDFD KVECADAQSS NLESFASAAN ELFSYKTKMT LLSKSEDFGL
1260 1270
ECAVKYSNPL KPLIYVLMLV CLSYL
Length:1,275
Mass (Da):145,563
Last modified:January 25, 2012 - v3
Checksum:i91E60BA3B0BD2BC9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD68208.1.
RefSeqiNP_495322.3. NM_062921.3.
UniGeneiCel.15603.

Genome annotation databases

EnsemblMetazoaiC56E6.6; C56E6.6; WBGene00016974.
GeneIDi174079.
KEGGicel:CELE_C56E6.6.
UCSCiC56E6.6. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD68208.1.
RefSeqiNP_495322.3. NM_062921.3.
UniGeneiCel.15603.

3D structure databases

ProteinModelPortaliQ18902.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C56E6.6.

Proteomic databases

EPDiQ18902.
PaxDbiQ18902.
PRIDEiQ18902.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC56E6.6; C56E6.6; WBGene00016974.
GeneIDi174079.
KEGGicel:CELE_C56E6.6.
UCSCiC56E6.6. c. elegans.

Organism-specific databases

CTDi174079.
WormBaseiC56E6.6; CE46222; WBGene00016974; lron-15.

Phylogenomic databases

eggNOGiKOG0619. Eukaryota.
COG4886. LUCA.
GeneTreeiENSGT00760000118777.
HOGENOMiHOG000016920.
InParanoidiQ18902.
OMAiSINMANT.
OrthoDBiEOG091G00XB.

Gene expression databases

BgeeiWBGene00016974.

Family and domain databases

Gene3Di3.80.10.10. 5 hits.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR003591. Leu-rich_rpt_typical-subtyp.
[Graphical view]
PfamiPF13855. LRR_8. 11 hits.
[Graphical view]
SMARTiSM00369. LRR_TYP. 28 hits.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 5 hits.
PROSITEiPS51450. LRR. 36 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ18902_CAEEL
AccessioniPrimary (citable) accession number: Q18902
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: January 25, 2012
Last modified: September 7, 2016
This is version 116 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.