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Protein
Submitted name:

Putative methyl-accepting chemotaxis receptor,MCP family

Gene

CD630_05380

Organism
Peptoclostridium difficile (strain 630) (Clostridium difficile)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Enzyme and pathway databases

BioCyciPDIF272563:G12WB-650-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative methyl-accepting chemotaxis receptor,MCP familyImported
Gene namesi
Ordered Locus Names:CD630_05380Imported
OrganismiPeptoclostridium difficile (strain 630) (Clostridium difficile)Imported
Taxonomic identifieri272563 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaeClostridioides
Proteomesi
  • UP000001978 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei185 – 207HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 35Sequence analysisAdd BLAST35
ChainiPRO_500418692936 – 567Sequence analysisAdd BLAST532

Interactioni

Protein-protein interaction databases

STRINGi272563.CD0538.

Structurei

3D structure databases

ProteinModelPortaliQ188Y1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini209 – 262HAMPInterPro annotationAdd BLAST54
Domaini312 – 541Methyl-accepting transducerInterPro annotationAdd BLAST230

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
KOiK03406.
OMAiNEMMAIS.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q188Y1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKREVKLSKL AIVLLIIIVL AVLAGIFSSI SSYKAFEKVE KSINDMNNLR
60 70 80 90 100
TQSQYIKDTT REISDVLRRY VFTGEKKNKD IYEKELYGKT RESALNKLEK
110 120 130 140 150
IGLTKSESNK ILEAKEISDS LVPTEQSAIK AVESNDKSKA QSIIFGSDYI
160 170 180 190 200
NSQEKMDSLI NEFQEDIVTR SNSKIVEVKK ELQSLILRTI FILSLLIILT
210 220 230 240 250
IIEYTVIKLK IVIPINKVEK HFSRIASGDL RTSIDVEESK SEIGLLVSSV
260 270 280 290 300
KKMQSMLLNY IDLIDSTLTS IAKGDLRVEI DQEFIGDFKS IKISLESIIN
310 320 330 340 350
SFNGDFSEIN LSAEQVASAS EQVAAGAQAL SQGATEQASS VEELASTINE
360 370 380 390 400
ISDGIKKCAD SASLACEVSD QSASQVGFGS RCMDDMMTSM GEISEKSSEI
410 420 430 440 450
SKIIKTIDEI AFQTNILALN AAVEAARAGQ YGRGFAVVAD EVRSLAGKSA
460 470 480 490 500
KAAQNTAILI EEAIKTVENG VRIAKETANA LDLVVNGVEK TTNYINGISS
510 520 530 540 550
AVHSQEVAIT QILSGIEQIS IVVQMNSATA EESAAASEEM SAQAQILKEL
560
VEKFHLKESE VRESSWV
Length:567
Mass (Da):61,977
Last modified:July 25, 2006 - v1
Checksum:iB2215F6B7C21ACCD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ67371.1.
RefSeqiWP_003425090.1. NZ_CP010905.1.
YP_001087014.1. NC_009089.1.

Genome annotation databases

EnsemblBacteriaiCAJ67371; CAJ67371; CD630_05380.
GeneIDi4916242.
KEGGicdf:CD630_05380.
pdc:CDIF630_00651.
PATRICi19439341. VBICloDif38397_0564.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ67371.1.
RefSeqiWP_003425090.1. NZ_CP010905.1.
YP_001087014.1. NC_009089.1.

3D structure databases

ProteinModelPortaliQ188Y1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272563.CD0538.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ67371; CAJ67371; CD630_05380.
GeneIDi4916242.
KEGGicdf:CD630_05380.
pdc:CDIF630_00651.
PATRICi19439341. VBICloDif38397_0564.

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
KOiK03406.
OMAiNEMMAIS.

Enzyme and pathway databases

BioCyciPDIF272563:G12WB-650-MONOMER.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ188Y1_PEPD6
AccessioniPrimary (citable) accession number: Q188Y1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: November 2, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.