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Q188Y1 (Q188Y1_CLOD6) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:CD630_05380 EMBL CAJ67371.1
OrganismClostridium difficile (strain 630) [Complete proteome] [HAMAP] EMBL CAJ67371.1
Taxonomic identifier272563 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceae

Protein attributes

Sequence length567 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionReceptor EMBL CAJ67371.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q188Y1 [UniParc].

Last modified July 25, 2006. Version 1.
Checksum: B2215F6B7C21ACCD

FASTA56761,977
        10         20         30         40         50         60 
MKREVKLSKL AIVLLIIIVL AVLAGIFSSI SSYKAFEKVE KSINDMNNLR TQSQYIKDTT 

        70         80         90        100        110        120 
REISDVLRRY VFTGEKKNKD IYEKELYGKT RESALNKLEK IGLTKSESNK ILEAKEISDS 

       130        140        150        160        170        180 
LVPTEQSAIK AVESNDKSKA QSIIFGSDYI NSQEKMDSLI NEFQEDIVTR SNSKIVEVKK 

       190        200        210        220        230        240 
ELQSLILRTI FILSLLIILT IIEYTVIKLK IVIPINKVEK HFSRIASGDL RTSIDVEESK 

       250        260        270        280        290        300 
SEIGLLVSSV KKMQSMLLNY IDLIDSTLTS IAKGDLRVEI DQEFIGDFKS IKISLESIIN 

       310        320        330        340        350        360 
SFNGDFSEIN LSAEQVASAS EQVAAGAQAL SQGATEQASS VEELASTINE ISDGIKKCAD 

       370        380        390        400        410        420 
SASLACEVSD QSASQVGFGS RCMDDMMTSM GEISEKSSEI SKIIKTIDEI AFQTNILALN 

       430        440        450        460        470        480 
AAVEAARAGQ YGRGFAVVAD EVRSLAGKSA KAAQNTAILI EEAIKTVENG VRIAKETANA 

       490        500        510        520        530        540 
LDLVVNGVEK TTNYINGISS AVHSQEVAIT QILSGIEQIS IVVQMNSATA EESAAASEEM 

       550        560 
SAQAQILKEL VEKFHLKESE VRESSWV 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM180355 Genomic DNA. Translation: CAJ67371.1.
RefSeqYP_001087014.1. NC_009089.1.

3D structure databases

ProteinModelPortalQ188Y1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272563.CD0538.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAJ67371; CAJ67371; CD630_05380.
GeneID4916242.
KEGGcdf:CD630_05380.
PATRIC19439341. VBICloDif38397_0564.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK03406.
OMATEEARNI.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK2534531.

Enzyme and pathway databases

BioCycCDIF272563:GJFE-671-MONOMER.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ188Y1_CLOD6
AccessionPrimary (citable) accession number: Q188Y1
Entry history
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: February 19, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)