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Protein
Submitted name:

Putative methyl-accepting chemotaxis receptor,MCP family

Gene

CD630_05380

Organism
Peptoclostridium difficile (strain 630) (Clostridium difficile)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Enzyme and pathway databases

BioCyciCDIF272563:GJFE-671-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative methyl-accepting chemotaxis receptor,MCP familyImported
Gene namesi
Ordered Locus Names:CD630_05380Imported
OrganismiPeptoclostridium difficile (strain 630) (Clostridium difficile)Imported
Taxonomic identifieri272563 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaePeptoclostridium
ProteomesiUP000001978 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi272563.CD0538.

Structurei

3D structure databases

ProteinModelPortaliQ188Y1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
KOiK03406.
OMAiNEMMAIS.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q188Y1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKREVKLSKL AIVLLIIIVL AVLAGIFSSI SSYKAFEKVE KSINDMNNLR
60 70 80 90 100
TQSQYIKDTT REISDVLRRY VFTGEKKNKD IYEKELYGKT RESALNKLEK
110 120 130 140 150
IGLTKSESNK ILEAKEISDS LVPTEQSAIK AVESNDKSKA QSIIFGSDYI
160 170 180 190 200
NSQEKMDSLI NEFQEDIVTR SNSKIVEVKK ELQSLILRTI FILSLLIILT
210 220 230 240 250
IIEYTVIKLK IVIPINKVEK HFSRIASGDL RTSIDVEESK SEIGLLVSSV
260 270 280 290 300
KKMQSMLLNY IDLIDSTLTS IAKGDLRVEI DQEFIGDFKS IKISLESIIN
310 320 330 340 350
SFNGDFSEIN LSAEQVASAS EQVAAGAQAL SQGATEQASS VEELASTINE
360 370 380 390 400
ISDGIKKCAD SASLACEVSD QSASQVGFGS RCMDDMMTSM GEISEKSSEI
410 420 430 440 450
SKIIKTIDEI AFQTNILALN AAVEAARAGQ YGRGFAVVAD EVRSLAGKSA
460 470 480 490 500
KAAQNTAILI EEAIKTVENG VRIAKETANA LDLVVNGVEK TTNYINGISS
510 520 530 540 550
AVHSQEVAIT QILSGIEQIS IVVQMNSATA EESAAASEEM SAQAQILKEL
560
VEKFHLKESE VRESSWV
Length:567
Mass (Da):61,977
Last modified:July 25, 2006 - v1
Checksum:iB2215F6B7C21ACCD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ67371.1.
RefSeqiWP_003425090.1. NZ_CP010905.1.
YP_001087014.1. NC_009089.1.

Genome annotation databases

EnsemblBacteriaiCAJ67371; CAJ67371; CD630_05380.
GeneIDi4916242.
KEGGicdf:CD630_05380.
PATRICi19439341. VBICloDif38397_0564.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ67371.1.
RefSeqiWP_003425090.1. NZ_CP010905.1.
YP_001087014.1. NC_009089.1.

3D structure databases

ProteinModelPortaliQ188Y1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272563.CD0538.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ67371; CAJ67371; CD630_05380.
GeneIDi4916242.
KEGGicdf:CD630_05380.
PATRICi19439341. VBICloDif38397_0564.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
KOiK03406.
OMAiNEMMAIS.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciCDIF272563:GJFE-671-MONOMER.

Family and domain databases

InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 630Imported.

Entry informationi

Entry nameiQ188Y1_PEPD6
AccessioniPrimary (citable) accession number: Q188Y1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: July 22, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.