Q188Y1 (Q188Y1_CLOD6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative methyl-accepting chemotaxis receptor,MCP family EMBL CAJ67371.1

Gene names

Ordered Locus Names:

CD630_05380 EMBL CAJ67371.1

Organism

Clostridium difficile (strain 630) [Complete proteome] [HAMAP] EMBL CAJ67371.1

Taxonomic identifier

272563 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptostreptococcaceae › Clostridium difficile

Protein attributes

Sequence length	567 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Receptor EMBL CAJ67371.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	chemotaxis Inferred from electronic annotation. Source: InterPro
Cellular_component	integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	signal transducer activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q188Y1 [UniParc]. Last modified July 25, 2006. Version 1. Checksum: B2215F6B7C21ACCD	FASTA	567	61,977
	10 20 30 40 50 60 MKREVKLSKL AIVLLIIIVL AVLAGIFSSI SSYKAFEKVE KSINDMNNLR TQSQYIKDTT 70 80 90 100 110 120 REISDVLRRY VFTGEKKNKD IYEKELYGKT RESALNKLEK IGLTKSESNK ILEAKEISDS 130 140 150 160 170 180 LVPTEQSAIK AVESNDKSKA QSIIFGSDYI NSQEKMDSLI NEFQEDIVTR SNSKIVEVKK 190 200 210 220 230 240 ELQSLILRTI FILSLLIILT IIEYTVIKLK IVIPINKVEK HFSRIASGDL RTSIDVEESK 250 260 270 280 290 300 SEIGLLVSSV KKMQSMLLNY IDLIDSTLTS IAKGDLRVEI DQEFIGDFKS IKISLESIIN 310 320 330 340 350 360 SFNGDFSEIN LSAEQVASAS EQVAAGAQAL SQGATEQASS VEELASTINE ISDGIKKCAD 370 380 390 400 410 420 SASLACEVSD QSASQVGFGS RCMDDMMTSM GEISEKSSEI SKIIKTIDEI AFQTNILALN 430 440 450 460 470 480 AAVEAARAGQ YGRGFAVVAD EVRSLAGKSA KAAQNTAILI EEAIKTVENG VRIAKETANA 490 500 510 520 530 540 LDLVVNGVEK TTNYINGISS AVHSQEVAIT QILSGIEQIS IVVQMNSATA EESAAASEEM 550 560 SAQAQILKEL VEKFHLKESE VRESSWV

References

[1]

"The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome." Sebaihia M., Wren B.W., Mullany P., Fairweather N.F., Minton N., Stabler R., Thomson N.R., Roberts A.P., Cerdeno-Tarraga A.M., Wang H., Holden M.T.G., Wright A., Churcher C., Quail M.A., Baker S., Bason N., Brooks K., Chillingworth T. , Cronin A., Davis P., Dowd L., Fraser A., Feltwell T., Hance Z., Holroyd S., Jagels K., Moule S., Mungall K., Price C., Rabbinowitsch R., Sharp S., Simmonds M., Steven K., Unwin L., Whithead S., Dupuy B., Dougan G., Barrell B.and.Parkhill.J. Nat. Genet. 38:779-786(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 630 EMBL CAJ67371.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM180355 Genomic DNA. Translation: CAJ67371.1.
RefSeq	YP_001087014.1. NC_009089.1.
3D structure databases
ProteinModelPortal	Q188Y1.
ModBase	Search...
Protein-protein interaction databases
STRING	272563.CD0538.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAJ67371; CAJ67371; CD630_05380.
GeneID	4916242.
KEGG	cdf:CD630_05380.
PATRIC	19439341. VBICloDif38397_0564.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0840.
HOGENOM	HOG000148074.
KO	K03406.
OMA	INEISDG.
ProtClustDB	CLSK2534531.
Enzyme and pathway databases
BioCyc	CDIF272563:GJFE-671-MONOMER.
Family and domain databases
InterPro	IPR024478. 4HB_MCP. IPR004090. Chemotax_Me-accpt_rcpt. IPR003660. HAMP_linker_domain. IPR004089. MCPsignal_dom. [Graphical view]
Pfam	PF12729. 4HB_MCP_1. 1 hit. PF00672. HAMP. 1 hit. PF00015. MCPsignal. 1 hit. [Graphical view]
PRINTS	PR00260. CHEMTRNSDUCR.
SMART	SM00304. HAMP. 1 hit. SM00283. MA. 1 hit. [Graphical view]
PROSITE	PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit. PS50885. HAMP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q188Y1_CLOD6

Accession

Primary (citable) accession number: Q188Y1

Entry history

Integrated into UniProtKB/TrEMBL:	July 25, 2006
Last sequence update:	July 25, 2006
Last modified:	May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)