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Protein
Submitted name:

Putative hydrolase, HAD superfamily, subfamily IIB

Gene

CD630_04670

Organism
Peptoclostridium difficile (strain 630) (Clostridium difficile)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative hydrolase, HAD superfamily, subfamily IIBImported (EC:3.1.3.-Imported)
Gene namesi
Ordered Locus Names:CD630_04670Imported
OrganismiPeptoclostridium difficile (strain 630) (Clostridium difficile)Imported
Taxonomic identifieri272563 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaePeptoclostridium
Proteomesi
  • UP000001978 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272563.CD0467.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3FZQX-ray2.10A/B2-271[»]
ProteinModelPortaliQ188R2.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ188R2.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini5 – 265261HAD-like_domInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4108X4Q. Bacteria.
COG0561. LUCA.
HOGENOMiHOG000062562.
KOiK07024.
OMAiITYENNI.
OrthoDBiEOG6K13V7.

Family and domain databases

Gene3Di3.40.50.1000. 2 hits.
InterProiIPR023214. HAD-like_dom.
IPR006379. HAD-SF_hydro_IIB.
IPR000150. Hypothet_cof.
[Graphical view]
PfamiPF08282. Hydrolase_3. 1 hit.
[Graphical view]
SUPFAMiSSF56784. SSF56784. 1 hit.
TIGRFAMsiTIGR00099. Cof-subfamily. 1 hit.
TIGR01484. HAD-SF-IIB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q188R2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYKLLILDID GTLRDEVYGI PESAKHAIRL CQKNHCSVVI CTGRSMGTIQ
60 70 80 90 100
DDVLSLGVDG YIAGGGNYIQ YHGELLYNQS FNQRLIKEVV CLLKKREVAF
110 120 130 140 150
SIESQEKVFM NQKAKEIFET MNQLKGTNSC INKQHIQEKI TYENNIEEYK
160 170 180 190 200
SQDIHKICLW SNEKVFDEVK DILQDKMELA QRDISSQYYE IIQKDFHKGK
210 220 230 240 250
AIKRLQERLG VTQKETICFG DGQNDIVMFQ ASDVTIAMKN SHQQLKDIAT
260 270
SICEDIFDNG IYKELKRRNI I
Length:271
Mass (Da):31,304
Last modified:June 28, 2011 - v2
Checksum:iF097FAE1AB90713C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ67295.2.
RefSeqiWP_009895496.1. NZ_CP010905.1.
YP_001086940.2. NC_009089.1.

Genome annotation databases

EnsemblBacteriaiCAJ67295; CAJ67295; CD630_04670.
GeneIDi4914238.
KEGGicdf:CD630_04670.
pdc:CDIF630_00595.
PATRICi19439195. VBICloDif38397_0491.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ67295.2.
RefSeqiWP_009895496.1. NZ_CP010905.1.
YP_001086940.2. NC_009089.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3FZQX-ray2.10A/B2-271[»]
ProteinModelPortaliQ188R2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272563.CD0467.

Protocols and materials databases

DNASUi4914238.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ67295; CAJ67295; CD630_04670.
GeneIDi4914238.
KEGGicdf:CD630_04670.
pdc:CDIF630_00595.
PATRICi19439195. VBICloDif38397_0491.

Phylogenomic databases

eggNOGiENOG4108X4Q. Bacteria.
COG0561. LUCA.
HOGENOMiHOG000062562.
KOiK07024.
OMAiITYENNI.
OrthoDBiEOG6K13V7.

Miscellaneous databases

EvolutionaryTraceiQ188R2.

Family and domain databases

Gene3Di3.40.50.1000. 2 hits.
InterProiIPR023214. HAD-like_dom.
IPR006379. HAD-SF_hydro_IIB.
IPR000150. Hypothet_cof.
[Graphical view]
PfamiPF08282. Hydrolase_3. 1 hit.
[Graphical view]
SUPFAMiSSF56784. SSF56784. 1 hit.
TIGRFAMsiTIGR00099. Cof-subfamily. 1 hit.
TIGR01484. HAD-SF-IIB. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 630Imported.
  2. "Crystal structure of putative haloacid dehalogenase-like hydrolase (YP_001086940.1) from Clostridium difficile 630 at 2.10 A resolution."
    Joint Center for Structural Genomics (JCSG)
    Submitted (JAN-2009) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS) OF 2-271.

Entry informationi

Entry nameiQ188R2_PEPD6
AccessioniPrimary (citable) accession number: Q188R2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: June 28, 2011
Last modified: May 11, 2016
This is version 67 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.