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Protein

Pseudouridine synthase

Gene

rluA

Organism
Peptoclostridium difficile (strain 630) (Clostridium difficile)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationSAAS annotation, LyaseImported, RNA-bindingPROSITE-ProRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciPDIF272563:G12WB-511-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Name:rluAImported
Ordered Locus Names:CD630_04050Imported
OrganismiPeptoclostridium difficile (strain 630) (Clostridium difficile)Imported
Taxonomic identifieri272563 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaeClostridioides
Proteomesi
  • UP000001978 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272563.CD0405

Structurei

3D structure databases

ProteinModelPortaliQ188I9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 65S4 RNA-bindingInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the pseudouridine synthase RsuA family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105I08 Bacteria
COG1187 LUCA
HOGENOMiHOG000044954
KOiK06183
OMAiSQGFGTR

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di3.10.290.10, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR000748 PsdUridine_synth_RsuA/RluB/E/F
IPR018496 PsdUridine_synth_RsuA/RluB_CS
IPR006145 PsdUridine_synth_RsuA/RluD
IPR002942 S4_RNA-bd
IPR036986 S4_RNA-bd_sf
PANTHERiPTHR21600 PTHR21600, 1 hit
PfamiView protein in Pfam
PF00849 PseudoU_synth_2, 1 hit
PF01479 S4, 1 hit
SMARTiView protein in SMART
SM00363 S4, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
TIGRFAMsiTIGR00093 TIGR00093, 1 hit
PROSITEiView protein in PROSITE
PS01149 PSI_RSU, 1 hit
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

Q188I9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKKQRIDKI LSNLGYGSRS EIKKYCKQGS VVVNGSEVSN PGTQVDTEND
60 70 80 90 100
EILFNGEEVI YREYIYLMMN KPDGYISATT DKYDPTVLDL IDLSYLAFEP
110 120 130 140 150
FPVGRLDKDT EGLLVLTNDG KLSHRVLSPK KHVPKTYYAK IDGVVTEEDV
160 170 180 190 200
EAFLEGVVLD DRYKTMPSQL NILKSDDESE IELTIHEGKF HQVKRMFESV
210 220 230 240
GKKVVYLKRL SMGNLKLDES LELGEYRELT DEEVKLIEER
Length:240
Mass (Da):27,442
Last modified:July 25, 2006 - v1
Checksum:iBABA35B7F780D91C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA Translation: CAJ67226.1
RefSeqiWP_011860778.1, NZ_CP010905.2
YP_001086871.1, NC_009089.1

Genome annotation databases

EnsemblBacteriaiCAJ67226; CAJ67226; CD630_04050
GeneIDi31351952
4914944
KEGGicdf:CD630_04050
pdc:CDIF630_00533
PATRICifig|272563.120.peg.425

Similar proteinsi

Entry informationi

Entry nameiQ188I9_PEPD6
AccessioniPrimary (citable) accession number: Q188I9
Entry historyiIntegrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: May 23, 2018
This is version 93 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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