Q188I5 (Q188I5_CLOD6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Acyl-CoA dehydrogenase, short-chain specific EMBL CAJ67220.1
EC=1.3.99.- EMBL CAJ67220.1

Gene names

Name:	acdB EMBL CAJ67220.1
Ordered Locus Names:	CD630_03990 EMBL CAJ67220.1

Organism

Clostridium difficile (strain 630) [Complete proteome] [HAMAP] EMBL CAJ67220.1

Taxonomic identifier

272563 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptostreptococcaceae › Clostridium difficile

Protein attributes

Sequence length	377 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the acyl-CoA dehydrogenase family. RuleBase RU004309

Ontologies

Keywords
Ligand	FAD RuleBase RU003714 Flavoprotein RuleBase RU003714
Molecular function	Oxidoreductase RuleBase RU003714 EMBL CAJ67220.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	acyl-CoA dehydrogenase activity Inferred from electronic annotation. Source: InterPro flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q188I5 [UniParc]. Last modified July 25, 2006. Version 1. Checksum: 8F7D8D213408B324	FASTA	377	40,864
	10 20 30 40 50 60 MLYNKEQELL RKAVRDFVSK ELDTLPAEMD KTGVMPKELI KKLADAKFIS SNIPEEYGGG 70 80 90 100 110 120 GAGYVSYAIV MEEIARRCAS TATFVTAGSS LASLPILYNG TEEQKQKYLK GIATGELIGA 130 140 150 160 170 180 FGLTEPGAGS DAGGQQTTAE LVGDHYILNG RKTFITNGPF CDVAIVIAVT DRSKGLRGTS 190 200 210 220 230 240 AFIVESKWDG FSTGAHEDKM GIRGTETSDL IFENVKVPKE NLLGKEGQGF KIAMGTLEVG 250 260 270 280 290 300 RIGVAALALG IAQGALDEAV KYTKQRVQFG KPIAKFQNTQ FTIADMETKV CAARGLVYDA 310 320 330 340 350 360 AQKRDAGMRV AQESAMAKYY ASEIANEVAY KALQLHGGYG FIKDYEIERM YRDARIVSIY 370 EGTSEVQKMV ISSNVLK

References

[1]

"The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome." Sebaihia M., Wren B.W., Mullany P., Fairweather N.F., Minton N., Stabler R., Thomson N.R., Roberts A.P., Cerdeno-Tarraga A.M., Wang H., Holden M.T.G., Wright A., Churcher C., Quail M.A., Baker S., Bason N., Brooks K., Chillingworth T. , Cronin A., Davis P., Dowd L., Fraser A., Feltwell T., Hance Z., Holroyd S., Jagels K., Moule S., Mungall K., Price C., Rabbinowitsch R., Sharp S., Simmonds M., Steven K., Unwin L., Whithead S., Dupuy B., Dougan G., Barrell B.and.Parkhill.J. Nat. Genet. 38:779-786(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 630 EMBL CAJ67220.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM180355 Genomic DNA. Translation: CAJ67220.1.
RefSeq	YP_001086865.1. NC_009089.1.
3D structure databases
ProteinModelPortal	Q188I5.
ModBase	Search...
Protein-protein interaction databases
STRING	272563.CD0399.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAJ67220; CAJ67220; CD630_03990.
GeneID	4914938.
KEGG	cdf:CD630_03990.
PATRIC	19439051. VBICloDif38397_0419.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1960.
HOGENOM	HOG000131659.
KO	K00248.
OMA	QMVIAAK.
ProtClustDB	CLSK965860.
Enzyme and pathway databases
BioCyc	CDIF272563:GJFE-516-MONOMER.
Family and domain databases
Gene3D	1.10.540.10. 1 hit. 2.40.110.10. 1 hit.
InterPro	IPR006089. Acyl-CoA_DH_CS. IPR006092. Acyl-CoA_DH_N. IPR006090. Acyl-CoA_Oxase/DH_1. IPR006091. Acyl-CoA_Oxase/DH_cen-dom. IPR009075. AcylCo_DH/oxidase_C. IPR013786. AcylCoA_DH/ox_N. IPR009100. AcylCoA_DH/oxidase. [Graphical view]
Pfam	PF00441. Acyl-CoA_dh_1. 1 hit. PF02770. Acyl-CoA_dh_M. 1 hit. PF02771. Acyl-CoA_dh_N. 1 hit. [Graphical view]
SUPFAM	SSF56645. AcylCoA_dehyd_NM. 1 hit. SSF47203. AcylCoADH_C_like. 1 hit.
PROSITE	PS00072. ACYL_COA_DH_1. 1 hit. PS00073. ACYL_COA_DH_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q188I5_CLOD6

Accession

Primary (citable) accession number: Q188I5

Entry history

Integrated into UniProtKB/TrEMBL:	July 25, 2006
Last sequence update:	July 25, 2006
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)