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Protein
Submitted name:

Acyl-CoA dehydrogenase, short-chain specific

Gene

acdB

Organism
Peptoclostridium difficile (strain 630) (Clostridium difficile)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. acyl-CoA dehydrogenase activity Source: InterPro
  2. flavin adenine dinucleotide binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Keywords - Ligandi

FADUniRule annotation, Flavoprotein

Enzyme and pathway databases

BioCyciCDIF272563:GJFE-516-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Acyl-CoA dehydrogenase, short-chain specificImported (EC:1.3.99.-Imported)
Gene namesi
Name:acdBImported
Ordered Locus Names:CD630_03990Imported
OrganismiPeptoclostridium difficile (strain 630) (Clostridium difficile)Imported
Taxonomic identifieri272563 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaePeptoclostridium
ProteomesiUP000001978 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272563.CD0399.

Structurei

3D structure databases

ProteinModelPortaliQ188I5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the acyl-CoA dehydrogenase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1960.
HOGENOMiHOG000131659.
KOiK00248.
OMAiNAHSTIA.
OrthoDBiEOG600DMX.

Family and domain databases

Gene3Di1.10.540.10. 1 hit.
2.40.110.10. 1 hit.
InterProiIPR006089. Acyl-CoA_DH_CS.
IPR006091. Acyl-CoA_Oxase/DH_cen-dom.
IPR009075. AcylCo_DH/oxidase_C.
IPR013786. AcylCoA_DH/ox_N.
IPR009100. AcylCoA_DH/oxidase_NM_dom.
[Graphical view]
PfamiPF00441. Acyl-CoA_dh_1. 1 hit.
PF02770. Acyl-CoA_dh_M. 1 hit.
PF02771. Acyl-CoA_dh_N. 1 hit.
[Graphical view]
SUPFAMiSSF47203. SSF47203. 1 hit.
SSF56645. SSF56645. 1 hit.
PROSITEiPS00072. ACYL_COA_DH_1. 1 hit.
PS00073. ACYL_COA_DH_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q188I5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLYNKEQELL RKAVRDFVSK ELDTLPAEMD KTGVMPKELI KKLADAKFIS
60 70 80 90 100
SNIPEEYGGG GAGYVSYAIV MEEIARRCAS TATFVTAGSS LASLPILYNG
110 120 130 140 150
TEEQKQKYLK GIATGELIGA FGLTEPGAGS DAGGQQTTAE LVGDHYILNG
160 170 180 190 200
RKTFITNGPF CDVAIVIAVT DRSKGLRGTS AFIVESKWDG FSTGAHEDKM
210 220 230 240 250
GIRGTETSDL IFENVKVPKE NLLGKEGQGF KIAMGTLEVG RIGVAALALG
260 270 280 290 300
IAQGALDEAV KYTKQRVQFG KPIAKFQNTQ FTIADMETKV CAARGLVYDA
310 320 330 340 350
AQKRDAGMRV AQESAMAKYY ASEIANEVAY KALQLHGGYG FIKDYEIERM
360 370
YRDARIVSIY EGTSEVQKMV ISSNVLK
Length:377
Mass (Da):40,864
Last modified:July 24, 2006 - v1
Checksum:i8F7D8D213408B324
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ67220.1.
RefSeqiYP_001086865.1. NC_009089.1.

Genome annotation databases

EnsemblBacteriaiCAJ67220; CAJ67220; CD630_03990.
GeneIDi4914938.
KEGGicdf:CD630_03990.
PATRICi19439051. VBICloDif38397_0419.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ67220.1.
RefSeqiYP_001086865.1. NC_009089.1.

3D structure databases

ProteinModelPortaliQ188I5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272563.CD0399.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ67220; CAJ67220; CD630_03990.
GeneIDi4914938.
KEGGicdf:CD630_03990.
PATRICi19439051. VBICloDif38397_0419.

Phylogenomic databases

eggNOGiCOG1960.
HOGENOMiHOG000131659.
KOiK00248.
OMAiNAHSTIA.
OrthoDBiEOG600DMX.

Enzyme and pathway databases

BioCyciCDIF272563:GJFE-516-MONOMER.

Family and domain databases

Gene3Di1.10.540.10. 1 hit.
2.40.110.10. 1 hit.
InterProiIPR006089. Acyl-CoA_DH_CS.
IPR006091. Acyl-CoA_Oxase/DH_cen-dom.
IPR009075. AcylCo_DH/oxidase_C.
IPR013786. AcylCoA_DH/ox_N.
IPR009100. AcylCoA_DH/oxidase_NM_dom.
[Graphical view]
PfamiPF00441. Acyl-CoA_dh_1. 1 hit.
PF02770. Acyl-CoA_dh_M. 1 hit.
PF02771. Acyl-CoA_dh_N. 1 hit.
[Graphical view]
SUPFAMiSSF47203. SSF47203. 1 hit.
SSF56645. SSF56645. 1 hit.
PROSITEiPS00072. ACYL_COA_DH_1. 1 hit.
PS00073. ACYL_COA_DH_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 630Imported.

Entry informationi

Entry nameiQ188I5_PEPD6
AccessioniPrimary (citable) accession number: Q188I5
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2006
Last sequence update: July 24, 2006
Last modified: March 31, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.