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Protein
Submitted name:

CYtochrome C

Gene

cyc-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • determination of adult lifespan Source: BHF-UCL
  • mitochondrial ATP synthesis coupled proton transport Source: WormBase
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
CYtochrome CImported
Gene namesi
Name:cyc-1Imported
ORF Names:C54G4.8Imported, CELE_C54G4.8Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiC54G4.8; CE05514; WBGene00000869; cyc-1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiQ18853.
PaxDbiQ18853.

Expressioni

Gene expression databases

BgeeiWBGene00000869.

Interactioni

Protein-protein interaction databases

STRINGi6239.C54G4.8.1.

Structurei

3D structure databases

ProteinModelPortaliQ18853.
SMRiQ18853. Positions 42-283.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini61 – 230170Cytochrome cInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG3052. Eukaryota.
COG2857. LUCA.
GeneTreeiENSGT00390000012445.
HOGENOMiHOG000003867.
InParanoidiQ18853.
KOiK00413.
OMAiKMLLMMG.
OrthoDBiEOG091G0FT2.
PhylomeDBiQ18853.

Family and domain databases

Gene3Di1.10.760.10. 1 hit.
InterProiIPR009056. Cyt_c-like_dom.
IPR002326. Cyt_c1.
IPR021157. Cyt_c1_TM_anchor_C.
[Graphical view]
PANTHERiPTHR10266. PTHR10266. 1 hit.
PfamiPF02167. Cytochrom_C1. 1 hit.
[Graphical view]
PRINTSiPR00603. CYTOCHROMEC1.
SUPFAMiSSF46626. SSF46626. 1 hit.
SSF81496. SSF81496. 1 hit.
PROSITEiPS51007. CYTC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q18853-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQRAVVQGSK RGLAALAGVT AASGMGLVYA LENSVSASGD NVHPYALPWA
60 70 80 90 100
HSGPFSSFDI ASVRRGYEVY KQVCAACHSM KFLHYRHFVD TIMTEEEAKA
110 120 130 140 150
EAADALINDV DDKGASIQRP GMLTDKLPNP YPNKKAAAAA NNGAAPPDLS
160 170 180 190 200
LMALARHGGD DYVFSLLTGY LEAPAGVKVD DGKAYNPYFP GGIISMPQQL
210 220 230 240 250
FDEGIEYKDG TPATMSQQAK DVSAFMHWAA EPFHDTRKKW ALKIAALIPF
260 270 280
VAVVLIYGKR HIWSFTKSQK FLFKTVKGRE PPKAQ
Length:285
Mass (Da):30,967
Last modified:November 1, 1996 - v1
Checksum:iF7F933F4C1314342
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CAA99820.1.
PIRiT20237.
RefSeqiNP_492207.1. NM_059806.3.
UniGeneiCel.17378.

Genome annotation databases

EnsemblMetazoaiC54G4.8; C54G4.8; WBGene00000869.
GeneIDi172582.
KEGGicel:CELE_C54G4.8.
UCSCiC54G4.8.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CAA99820.1.
PIRiT20237.
RefSeqiNP_492207.1. NM_059806.3.
UniGeneiCel.17378.

3D structure databases

ProteinModelPortaliQ18853.
SMRiQ18853. Positions 42-283.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C54G4.8.1.

Proteomic databases

EPDiQ18853.
PaxDbiQ18853.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC54G4.8; C54G4.8; WBGene00000869.
GeneIDi172582.
KEGGicel:CELE_C54G4.8.
UCSCiC54G4.8.1. c. elegans.

Organism-specific databases

CTDi172582.
WormBaseiC54G4.8; CE05514; WBGene00000869; cyc-1.

Phylogenomic databases

eggNOGiKOG3052. Eukaryota.
COG2857. LUCA.
GeneTreeiENSGT00390000012445.
HOGENOMiHOG000003867.
InParanoidiQ18853.
KOiK00413.
OMAiKMLLMMG.
OrthoDBiEOG091G0FT2.
PhylomeDBiQ18853.

Gene expression databases

BgeeiWBGene00000869.

Family and domain databases

Gene3Di1.10.760.10. 1 hit.
InterProiIPR009056. Cyt_c-like_dom.
IPR002326. Cyt_c1.
IPR021157. Cyt_c1_TM_anchor_C.
[Graphical view]
PANTHERiPTHR10266. PTHR10266. 1 hit.
PfamiPF02167. Cytochrom_C1. 1 hit.
[Graphical view]
PRINTSiPR00603. CYTOCHROMEC1.
SUPFAMiSSF46626. SSF46626. 1 hit.
SSF81496. SSF81496. 1 hit.
PROSITEiPS51007. CYTC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ18853_CAEEL
AccessioniPrimary (citable) accession number: Q18853
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.