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Protein
Submitted name:

Uncharacterized protein

Gene

C54G10.4

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:C54G10.4Imported, CELE_C54G10.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC54G10.4a; CE05519; WBGene00008320.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence analysisAdd
BLAST
Chaini21 – 310290Sequence analysisPRO_5004187023Add
BLAST

Proteomic databases

PaxDbiQ18844.

Expressioni

Gene expression databases

ExpressionAtlasiQ18844. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi6239.C54G10.4b.1.

Structurei

3D structure databases

ProteinModelPortaliQ18844.
SMRiQ18844. Positions 7-276.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the mitochondrial carrier (TC 2.A.29) family. [View classification]UniRule annotationSAAS annotation

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

eggNOGiKOG0758. Eukaryota.
ENOG410XS86. LUCA.
GeneTreeiENSGT00700000104295.
HOGENOMiHOG000168307.
OrthoDBiEOG7MSMP1.

Family and domain databases

Gene3Di1.50.40.10. 1 hit.
InterProiIPR018108. Mitochondrial_sb/sol_carrier.
IPR023395. Mt_carrier_dom.
[Graphical view]
PfamiPF00153. Mito_carr. 3 hits.
[Graphical view]
SUPFAMiSSF103506. SSF103506. 1 hit.
PROSITEiPS50920. SOLCAR. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q18844-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSALLDLFAG SLGGAAGVLA GHPLDTVKVR LQTQSGPTPQ YRGTFHCFKL
60 70 80 90 100
IVQKEGFRGL YKGMSSPLLS LSAINAIVFG VHGGTCRQME DPDSITSHFV
110 120 130 140 150
GGCAAGMAQS VIAAPTERIK LLLQIQDDKA HTKFNGPIDA TKQLLRTHGL
160 170 180 190 200
KSLTRGFLAT VARDAPAFGV YFASYEWMAR SMCKDGETST LSSGQLLFAG
210 220 230 240 250
GTAGMLSWLF NYQTDIIKSR FQADNSYKSY MHCIKQTYLE RGYRGFFVGL
260 270 280 290 300
NSALIRAFPS NAATFFTVEW TYRILLDFNV IDNVTKEAEK ICAESQLLPF
310
EELTLSYLIL
Length:310
Mass (Da):34,021
Last modified:November 1, 1996 - v1
Checksum:iC880ABE6458598D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAA99811.1.
PIRiT20229.
RefSeqiNP_506621.1. NM_074220.3.
UniGeneiCel.8789.

Genome annotation databases

EnsemblMetazoaiC54G10.4a; C54G10.4a; WBGene00008320.
GeneIDi179969.
UCSCiC54G10.4b.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAA99811.1.
PIRiT20229.
RefSeqiNP_506621.1. NM_074220.3.
UniGeneiCel.8789.

3D structure databases

ProteinModelPortaliQ18844.
SMRiQ18844. Positions 7-276.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C54G10.4b.1.

Proteomic databases

PaxDbiQ18844.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC54G10.4a; C54G10.4a; WBGene00008320.
GeneIDi179969.
UCSCiC54G10.4b.1. c. elegans.

Organism-specific databases

CTDi179969.
WormBaseiC54G10.4a; CE05519; WBGene00008320.

Phylogenomic databases

eggNOGiKOG0758. Eukaryota.
ENOG410XS86. LUCA.
GeneTreeiENSGT00700000104295.
HOGENOMiHOG000168307.
OrthoDBiEOG7MSMP1.

Miscellaneous databases

NextBioi907588.

Gene expression databases

ExpressionAtlasiQ18844. baseline and differential.

Family and domain databases

Gene3Di1.50.40.10. 1 hit.
InterProiIPR018108. Mitochondrial_sb/sol_carrier.
IPR023395. Mt_carrier_dom.
[Graphical view]
PfamiPF00153. Mito_carr. 3 hits.
[Graphical view]
SUPFAMiSSF103506. SSF103506. 1 hit.
PROSITEiPS50920. SOLCAR. 3 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ18844_CAEEL
AccessioniPrimary (citable) accession number: Q18844
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 119 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.