Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative formate/nitrite transporter

Gene

CD630_22300

Organism
Peptoclostridium difficile (strain 630) (Clostridium difficile)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi3 – 31ZincCombined sources
Metal bindingi7 – 71ZincCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-bindingCombined sources, ZincCombined sources

Enzyme and pathway databases

BioCyciCDIF272563:GJFE-2440-MONOMER.

Protein family/group databases

TCDBi1.A.16.3.3. the formate-nitrite transporter (fnt) family.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative formate/nitrite transporterImported
Gene namesi
Ordered Locus Names:CD630_22300Imported
OrganismiPeptoclostridium difficile (strain 630) (Clostridium difficile)Imported
Taxonomic identifieri272563 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaePeptoclostridium
Proteomesi
  • UP000001978 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei27 – 5024HelicalSequence analysisAdd
BLAST
Transmembranei62 – 8625HelicalSequence analysisAdd
BLAST
Transmembranei107 – 13125HelicalSequence analysisAdd
BLAST
Transmembranei151 – 17222HelicalSequence analysisAdd
BLAST
Transmembranei184 – 20623HelicalSequence analysisAdd
BLAST
Transmembranei226 – 25227HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

DIPiDIP-59656N.
STRINGi272563.CD2230.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3TDOX-ray2.20A/B/C/D/E2-258[»]
3TDPX-ray2.99A/B/C/D/E2-256[»]
3TDRX-ray3.20A/B/C/D/E/F/G/H/I/J2-258[»]
3TDSX-ray1.98A/B/C/D/E2-258[»]
3TDXX-ray2.50A/B/C/D/E2-258[»]
3TE0X-ray2.09A/B/C/D/E2-258[»]
3TE1X-ray2.39A/B/C/D/E2-258[»]
3TE2X-ray2.30A/B/C/D/E2-258[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4107V9H. Bacteria.
COG2116. LUCA.
HOGENOMiHOG000271392.
KOiK02598.
OMAiVANMTIY.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000292. For/NO2_transpt.
IPR024002. For/NO2_transpt_CS.
[Graphical view]
PfamiPF01226. Form_Nir_trans. 1 hit.
[Graphical view]
PROSITEiPS01005. FORMATE_NITRITE_TP_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q186B7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHKETLDKLT NAAINKINLL NTSKVKYLVS SAFAGLYVGI GILLIFTIGG
60 70 80 90 100
LLTDAGSPMT KIVMGLSFAI ALSLVIMTGT ELFTGNNMVM SAGMLNKGVS
110 120 130 140 150
IKDTSKIWAY SWVGNLIGAL VLGIIFVGTG LVDKGPVAEF FANTAASKAS
160 170 180 190 200
MPFTALFFRG ILCNILVCVS VLCSFRTNSD TAKIIMIFLC LFAFITSGFE
210 220 230 240 250
HSVANMTIYS VSLFSPTIST VTIGGAIYNL VAVTLGNIVG GALFMGLGTY

ILGKEKLN
Length:258
Mass (Da):27,231
Last modified:July 25, 2006 - v1
Checksum:i037BF755F79D2421
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ69115.1.
RefSeqiWP_003433833.1. NZ_CP010905.1.
YP_001088744.1. NC_009089.1.

Genome annotation databases

EnsemblBacteriaiCAJ69115; CAJ69115; CD630_22300.
GeneIDi4915350.
KEGGicdf:CD630_22300.
pdc:CDIF630_02463.
PATRICi19442917. VBICloDif38397_2345.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ69115.1.
RefSeqiWP_003433833.1. NZ_CP010905.1.
YP_001088744.1. NC_009089.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3TDOX-ray2.20A/B/C/D/E2-258[»]
3TDPX-ray2.99A/B/C/D/E2-256[»]
3TDRX-ray3.20A/B/C/D/E/F/G/H/I/J2-258[»]
3TDSX-ray1.98A/B/C/D/E2-258[»]
3TDXX-ray2.50A/B/C/D/E2-258[»]
3TE0X-ray2.09A/B/C/D/E2-258[»]
3TE1X-ray2.39A/B/C/D/E2-258[»]
3TE2X-ray2.30A/B/C/D/E2-258[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-59656N.
STRINGi272563.CD2230.

Protein family/group databases

TCDBi1.A.16.3.3. the formate-nitrite transporter (fnt) family.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ69115; CAJ69115; CD630_22300.
GeneIDi4915350.
KEGGicdf:CD630_22300.
pdc:CDIF630_02463.
PATRICi19442917. VBICloDif38397_2345.

Phylogenomic databases

eggNOGiENOG4107V9H. Bacteria.
COG2116. LUCA.
HOGENOMiHOG000271392.
KOiK02598.
OMAiVANMTIY.

Enzyme and pathway databases

BioCyciCDIF272563:GJFE-2440-MONOMER.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000292. For/NO2_transpt.
IPR024002. For/NO2_transpt_CS.
[Graphical view]
PfamiPF01226. Form_Nir_trans. 1 hit.
[Graphical view]
PROSITEiPS01005. FORMATE_NITRITE_TP_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ186B7_PEPD6
AccessioniPrimary (citable) accession number: Q186B7
Entry historyi
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: September 7, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.