Unreviewed, UniProtKB/TrEMBL Q18679 (Q18679_CAEEL)

Names and origin

Protein names

Submitted name:
    Protein C47E12.3, partially confirmed by transcript evidence EMBL CAA93106.2

Gene names

ORF Names:

C47E12.3 EMBL CAA93106.2

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	568 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	calcium ion binding Inferred from electronic annotation. Source: InterPro mannosyl-oligosaccharide 1,2-alpha-mannosidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q18679-1 [UniParc]. Last modified June 1, 2003. Version 2. Checksum: 451B660818BD23DC	FASTA	568	64,000
	10 20 30 40 50 60 MKFVKNVLIF IALFSTTCSL KTTKNPFLLT KEEIKYASIS DVDLQYGLAK TREMFQFGWD 70 80 90 100 110 120 NYMEHAFPAD ELDPIHCRGR GHDHDNPDNI NVNDVLGDYS LGLIDTLDSL VVFGDADEFK 130 140 150 160 170 180 RAVNLVIKTV SFEKNTTVQV FESTIRVMGG LLAAHMIAAD KTNRFGPFYM SDYGGELLTL 190 200 210 220 230 240 AHDLAGRLLP AFDGTATGIP YTRINLQKGI LPGTTNSTCT SGAGSLLLEF GVLSKLLGDD 250 260 270 280 290 300 TYERLARRVN EKLWNLRNEV TGLHGNLIDI QTGEWLGHLA GLGAGIDSFY EYMLKSYILF 310 320 330 340 350 360 GNQRDLDMYN ESFARITTYM RRGRSRCSSL EGDIPIYVNV DSRDGSTSNT WIDSLQASFA 370 380 390 400 410 420 GVLVLAGEVD EAVCHHALYY AIWKKYGVLP ERFNWQLQAP DVSFYPLRPE FVESTYLLYT 430 440 450 460 470 480 ATKNPFYQHV GLEILDSLET ITRVKCGFAT VHDVIDGSLE DRMESFFLSE TLKYLYLLFD 490 500 510 520 530 540 VDHPINKEQQ ESVLFSTEGH IFPISPLFNL PPTPPSQYDP PLKPLPRTNS SFCETATDFT 550 560 FGTPPLRHSQ MRELFKVIGV DSVLHDWL

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
[2]	"Proteomics reveals N-linked glycoprotein diversity in Caenorhabditis elegans and suggests an atypical translocation mechanism for integral membrane proteins." Kaji H., Kamiie J., Kawakami H., Kido K., Yamauchi Y., Shinkawa T., Taoka M., Takahashi N., Isobe T. Mol. Cell. Proteomics 6:2100-2109(2007) [PubMed: 17761667] [Abstract] Cited for: GLYCOSYLATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY.

Cross-references

Sequence databases
EMBLGenBankDDBJ	Z68882 Genomic DNA. Translation: CAA93106.2.
PIR	T20009.
RefSeq	NP_501802.2.
UniGene	Cel.23425
3D structure databases
HSSP	HSSP built from PDB template 1DL2 based on UniProtKB P32906.
ModBase	Search...
Protein family/group databases
CAZy	GH47. Glycoside Hydrolase Family 47.
Genome annotation databases
Ensembl	C47E12.3. Caenorhabditis elegans. [Contig view]
GeneID	177857.
KEGG	cel:C47E12.3.
NMPDR	fig|6239.3.peg.14743.
Organism-specific databases
WormBase	WBGene00008148. C47E12.3.
WormPep	C47E12.3. CE33766. [WorfDB]
Phylogenomic databases
OMA	Q18679. DLARGMF.
Gene expression databases
ArrayExpress	Q18679.
Family and domain databases
InterPro	IPR001382. Glyco_hydro_47. [Graphical view]
Gene3D	G3DSA:1.50.10.50. Glyco_hydro_47. 1 hit.
PANTHER	PTHR11742. Glyco_hydro_47. 1 hit.
Pfam	PF01532. Glyco_hydro_47. 1 hit. [Graphical view]
PRINTS	PR00747. GLYHDRLASE47.
ProtoNet	Search...
Other Resources
NextBio	898686.

Entry information

Entry name

Q18679_CAEEL

Accession

Primary (citable) accession number: Q18679

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	June 1, 2003
Last modified:	June 16, 2009
This is version 55 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)