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Protein
Submitted name:

SCP-Like extracellular protein

Gene

scl-8

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

ReactomeiR-CEL-6798695. Neutrophil degranulation.

Names & Taxonomyi

Protein namesi
Submitted name:
SCP-Like extracellular proteinImported
Gene namesi
Name:scl-8Imported
ORF Names:C39E9.6Imported, CELE_C39E9.6Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiC39E9.6; CE05389; WBGene00008030; scl-8.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 16Sequence analysisAdd BLAST16
ChainiPRO_500418684917 – 210Sequence analysisAdd BLAST194

Proteomic databases

PaxDbiQ18540.
PeptideAtlasiQ18540.

Expressioni

Gene expression databases

BgeeiWBGene00008030.

Interactioni

Protein-protein interaction databases

STRINGi6239.C39E9.6.

Structurei

3D structure databases

ProteinModelPortaliQ18540.
SMRiQ18540.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 183SCPInterPro annotationAdd BLAST163

Sequence similaritiesi

Belongs to the CRISP family.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3017. Eukaryota.
COG2340. LUCA.
GeneTreeiENSGT00760000119004.
HOGENOMiHOG000036879.
InParanoidiQ18540.
OMAiEQSTGLC.
OrthoDBiEOG091G048D.
PhylomeDBiQ18540.

Family and domain databases

Gene3Di3.40.33.10. 1 hit.
InterProiView protein in InterPro
IPR001283. Allrgn_V5/Tpx1.
IPR014044. CAP_domain.
IPR002413. V5_allergen.
PANTHERiPTHR10334. PTHR10334. 1 hit.
PfamiView protein in Pfam
PF00188. CAP. 1 hit.
PRINTSiPR00838. V5ALLERGEN.
PR00837. V5TPXLIKE.
SMARTiView protein in SMART
SM00198. SCP. 1 hit.
SUPFAMiSSF55797. SSF55797. 1 hit.

Sequencei

Sequence statusi: Complete.

Q18540-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTLLVLAVA CVGVYAQFSE GGKQSILNAH NDIRSRIAKG NYVAKGNRKE
60 70 80 90 100
SATNMLKMKW DSSLEQSAQN YANGCHMQHS TNDKTIGENL YWEWSGDPFS
110 120 130 140 150
DLDKFGKIAT VAWDHEFEQF GWNSNKFSLA LFNTGVAHAT QIAWAPTGKI
160 170 180 190 200
GCGVKNCGRD ARRGGLFQVA IVCQYRVRGN FFFKNIYNSG ATCSACPAGT
210
SCEQSTGLCA
Length:210
Mass (Da):23,030
Last modified:November 1, 1996 - v1
Checksum:i06AEA89CD24D0E2F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAA94332.1.
PIRiT19849.
RefSeqiNP_502510.1. NM_070109.1.
UniGeneiCel.13367.

Genome annotation databases

EnsemblMetazoaiC39E9.6; C39E9.6; WBGene00008030.
GeneIDi183345.
KEGGicel:CELE_C39E9.6.
UCSCiC39E9.6. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiQ18540_CAEEL
AccessioniPrimary (citable) accession number: Q18540
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: August 30, 2017
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported