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Protein
Submitted name:

SCP-Like extracellular protein

Gene

scl-6

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

ReactomeiR-CEL-6798695. Neutrophil degranulation.

Names & Taxonomyi

Protein namesi
Submitted name:
SCP-Like extracellular proteinImported
Gene namesi
Name:scl-6Imported
ORF Names:C39E9.4Imported, CELE_C39E9.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiC39E9.4; CE05387; WBGene00008028; scl-6.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 18Sequence analysisAdd BLAST18
ChainiPRO_500418677819 – 209Sequence analysisAdd BLAST191

Proteomic databases

PaxDbiQ18538.

Expressioni

Gene expression databases

BgeeiWBGene00008028.

Interactioni

Protein-protein interaction databases

DIPiDIP-25010N.
MINTiMINT-1055821.
STRINGi6239.C39E9.4.

Structurei

3D structure databases

ProteinModelPortaliQ18538.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini23 – 182SCPInterPro annotationAdd BLAST160

Sequence similaritiesi

Belongs to the CRISP family.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3017. Eukaryota.
COG2340. LUCA.
GeneTreeiENSGT00900000141278.
HOGENOMiHOG000036879.
InParanoidiQ18538.
OMAiENVYAYW.
OrthoDBiEOG091G0D4V.
PhylomeDBiQ18538.

Family and domain databases

Gene3Di3.40.33.10. 1 hit.
InterProiView protein in InterPro
IPR001283. Allrgn_V5/Tpx1.
IPR014044. CAP_domain.
IPR035940. CAP_sf.
IPR002413. V5_allergen.
PANTHERiPTHR10334. PTHR10334. 1 hit.
PfamiView protein in Pfam
PF00188. CAP. 1 hit.
PRINTSiPR00838. V5ALLERGEN.
PR00837. V5TPXLIKE.
SMARTiView protein in SMART
SM00198. SCP. 1 hit.
SUPFAMiSSF55797. SSF55797. 1 hit.

Sequencei

Sequence statusi: Complete.

Q18538-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSLLVFATS LLIVLVDAEF SSSTQQFIVD LHNSFRSKLA TGTYSINGTL
60 70 80 90 100
KPAGSNIRKM SWDSTLATSA QTYANTCPTG FSNTQGTGEN LYWRTTSANI
110 120 130 140 150
SGLDIYGGAA SVSWEQEFQK YGWATNYFSQ ELFDTGVGNG TQMAWAKTNL
160 170 180 190 200
VGCGVKNCGK DSTGLNKVAV VCHYKPLGRY VDQMIYTAGF TCSQCPTGTS

CDQTTGLCA
Length:209
Mass (Da):22,459
Last modified:November 1, 1996 - v1
Checksum:iD9A915316027AFAA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAA94330.1.
PIRiT19847.
RefSeqiNP_502508.1. NM_070107.1.
UniGeneiCel.13369.

Genome annotation databases

EnsemblMetazoaiC39E9.4; C39E9.4; WBGene00008028.
GeneIDi183343.
KEGGicel:CELE_C39E9.4.
UCSCiC39E9.4. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiQ18538_CAEEL
AccessioniPrimary (citable) accession number: Q18538
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 25, 2017
This is version 112 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported