Q18529 (Q18529_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein C39D10.7 EMBL CCD63857.1

Gene names

ORF Names:

C39D10.7 EMBL CCD63857.1 WormBase C39D10.7

Organism

Caenorhabditis elegans

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	1185 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	chitin metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	chitin binding Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
mpz-1	A4LBC4	2	EBI-314884,EBI-2915667

Sequences

	Sequence		Length	Mass (Da)
	Q18529 [UniParc]. Last modified December 1, 2001. Version 2. Checksum: 4591121E2F38A8CE	FASTA	1,185	130,494
	10 20 30 40 50 60 MDWAFDQYLN SNLQMRQLSI FAAAVILISA DAKNVLNPKG PPCPDGDGLY AVGCSSKYLQ 70 80 90 100 110 120 CVNNVEYEQS CPEGLYFDRL LARCERRSSN HLCATGDRVT LNVRQKAVSI NCVGRLSGDY 130 140 150 160 170 180 ALDKTVCNEN YYQCANGISY MRKCPYQQVY VPILKRCDYH TNCNASGGVK DQAAAAYASP 190 200 210 220 230 240 TYDSDNYIVT TKEFENGHNG LDCKVTGDMH FTDNVKCSPY FWQCSNGKLF RKTCPEKLIY 250 260 270 280 290 300 VLDQNLCDFP ESVKDCPEYN GSETSYRAPK TTTSSSSYGS IAEAPVDPTP YAPASAPVYS 310 320 330 340 350 360 PPRTTYVPRS TSAAPPNPPP QNPTAAPYVP TEATPSPVFS STVRYNPAVH GDCKNRDGIF 370 380 390 400 410 420 GIKECHASFL SCDNGVGRVI QCADNLVFDT RVSACEFAAI CLEPRKPEDV PVLYNHGGAY 430 440 450 460 470 480 NERPAEVKVD FDCTGKPNGK YIKEACTKSF FTCHDGRAFA NDCPGDLVFN KATGTCDFAE 490 500 510 520 530 540 NCEKNYMEPS QIYKGEDTPT TTIGYSSSVV YTTTEQPATK PYTQPPRDTE RPSTIYGRPI 550 560 570 580 590 600 YTKAPTTVGY EQPKATYTTQ APVTTTIALD DFSCKHLADG NHASGLCKSV FYICANGQVV 610 620 630 640 650 660 ATTCPANLIF NPYVGECDYS TNVRDCQGYQ PTTTPSYSYP KTTSKPYEQP STTQGYAPIE 670 680 690 700 710 720 YTPVTPGYAP QYTSTIFTTT LSPKYAAMCA KRDDGNYGFD CEKYLIKCYN RKTFKFPCPS 730 740 750 760 770 780 GLYYSRLQDK CDVKENVEGC PEYKPTTDAT PAAEQPVISY QNYGYSQSTT KAYNPSVTTP 790 800 810 820 830 840 SPQHAAFCER LENGNYGLDC EDYYISCNNF ETTINRCPAG LFYSKLNNRC DYKEHVEDCP 850 860 870 880 890 900 EYKPTPSTTP AAEQPGTTKY TTYNYPNIDY TSTTPGPVDT TPLAKAFSCS GRPDGIYALP 910 920 930 940 950 960 YCSQDYVQCM QGRSLISSCA PGLFYNEKNG MCAYKHTVDT CKIGKGSDII DSNACFGKSD 970 980 990 1000 1010 1020 GYYSAGCSSY YFSCIDEQIR KMSCPNSLKF SKESEKCVFP IDAKECSIAT TLDRTPPAVP 1030 1040 1050 1060 1070 1080 SDFCTIRSNG LHHLKMCSPH YIVCDNGRAF SGTCIAPLVY NGDTQTCNYK STNKDCGNDY 1090 1100 1110 1120 1130 1140 IPPVAEVTSS YTTYTTKRFE QPAPTTTAAP YQPQTTTTGK VLYKAAYTTT ATQYEEPATT 1150 1160 1170 1180 PSRDVETPTT TTHKPYETTT EAQDATTTTT ASYVAPTTSS AYKSY

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FO080457 Genomic DNA. Translation: CCD63857.1.
RefSeq	NP_509334.2. NM_076933.5.
UniGene	Cel.16866.
3D structure databases
ProteinModelPortal	Q18529.
SMR	Q18529. Positions 47-90, 115-167, 437-484, 577-624, 689-741, 958-1003, 1028-1071.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-27006N.
IntAct	Q18529. 17 interactions.
MINT	MINT-114746.
STRING	Q18529.
Protein family/group databases
CAZy	CBM14. Carbohydrate-Binding Module Family 14.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	C39D10.7.1; C39D10.7.1; C39D10.7. C39D10.7.2; C39D10.7.2; C39D10.7.
GeneID	181050.
KEGG	cel:C39D10.7.
NMPDR	fig|6239.3.peg.23887.
UCSC	C39D10.7.1. c. elegans.
Organism-specific databases
CTD	181050.
WormBase	C39D10.7; CE29712; WBGene00016534.
Phylogenomic databases
eggNOG	meNOG26689.
GeneTree	EMGT00050000000345.
HOGENOM	HBG388623.
InParanoid	Q18529.
OMA	DGNHASG.
PhylomeDB	Q18529.
Gene expression databases
ArrayExpress	Q18529.
Family and domain databases
InterPro	IPR002557. Chitin-bd_dom. [Graphical view]
Gene3D	G3DSA:2.170.140.10. Chitin-bd_dom. 11 hits.
Pfam	PF01607. CBM_14. 11 hits. [Graphical view]
SMART	SM00494. ChtBD2. 11 hits. [Graphical view]
SUPFAM	SSF57625. Chitin_bind_PerA. 11 hits.
PROSITE	PS50940. CHIT_BIND_II. 11 hits. [Graphical view]
ProtoNet	Search...
Other
NextBio	912176.

Entry information

Entry name

Q18529_CAEEL

Accession

Primary (citable) accession number: Q18529

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	December 1, 2001
Last modified:	January 25, 2012
This is version 77 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)