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Protein

Serpentine receptor class gamma-15

Gene

srg-15

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Serpentine receptor class gamma-15
Short name:
Protein srg-15
Gene namesi
Name:srg-15
ORF Names:C34C6.1
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiC34C6.1; CE33033; WBGene00005172; srg-15.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei29 – 4921HelicalSequence analysisAdd
BLAST
Transmembranei57 – 7721HelicalSequence analysisAdd
BLAST
Transmembranei85 – 10521HelicalSequence analysisAdd
BLAST
Transmembranei151 – 17121HelicalSequence analysisAdd
BLAST
Transmembranei197 – 21721HelicalSequence analysisAdd
BLAST
Transmembranei240 – 26021HelicalSequence analysisAdd
BLAST
Transmembranei268 – 28821HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 320320Serpentine receptor class gamma-15PRO_0000104564Add
BLAST

Proteomic databases

PaxDbiQ18428.

Structurei

3D structure databases

ProteinModelPortaliQ18428.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410KAM5. Eukaryota.
ENOG4110I53. LUCA.
GeneTreeiENSGT00530000064349.
HOGENOMiHOG000021110.
InParanoidiQ18428.
OMAiSPLCPIV.
OrthoDBiEOG7DJSRB.
PhylomeDBiQ18428.

Family and domain databases

InterProiIPR000609. 7TM_GPCR_serpentine_rcpt_Srg.
[Graphical view]
PfamiPF02118. Srg. 1 hit.
[Graphical view]
PRINTSiPR00698. TMPROTEINSRG.

Sequencei

Sequence statusi: Complete.

Q18428-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTNYSEPDP LVCDETYSSS IEILKYLLTI SYLIPGGILH LFILHTILVT
60 70 80 90 100
RRGYFKGSSF FAIFALDSVS SIIIVFIDSF YGRLFLYVPP LCPIVGPFFW
110 120 130 140 150
ASSLIPKIYF YLSVHTRLSK CVAHICMVLN RMTCVLMPTY YGQIWRKLTK
160 170 180 190 200
VSLVIICILP LGGTWNIIIS PRFYVLPSYG GFAISYVRAI PWASSSLFQS
210 220 230 240 250
IYILTALVFT FICTSVTLYK LISLSDRIKS AEKSLCFSNI YISLTFLAAA
260 270 280 290 300
ASQALYAFCT SCMSSDLLFT AQFLAFDMFT VGSAVILFWS NSQIRGLILP
310 320
SKAEDDRIFR VQTINNSFTH
Length:320
Mass (Da):36,077
Last modified:June 1, 2003 - v2
Checksum:iF4109BEE4C973692
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z66494 Genomic DNA. Translation: CAA91262.2.
PIRiT19710.
RefSeqiNP_495851.2. NM_063450.2.
UniGeneiCel.25996.

Genome annotation databases

EnsemblMetazoaiC34C6.1; C34C6.1; WBGene00005172.
GeneIDi183195.
KEGGicel:CELE_C34C6.1.
UCSCiC34C6.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z66494 Genomic DNA. Translation: CAA91262.2.
PIRiT19710.
RefSeqiNP_495851.2. NM_063450.2.
UniGeneiCel.25996.

3D structure databases

ProteinModelPortaliQ18428.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiQ18428.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC34C6.1; C34C6.1; WBGene00005172.
GeneIDi183195.
KEGGicel:CELE_C34C6.1.
UCSCiC34C6.1. c. elegans.

Organism-specific databases

CTDi183195.
WormBaseiC34C6.1; CE33033; WBGene00005172; srg-15.

Phylogenomic databases

eggNOGiENOG410KAM5. Eukaryota.
ENOG4110I53. LUCA.
GeneTreeiENSGT00530000064349.
HOGENOMiHOG000021110.
InParanoidiQ18428.
OMAiSPLCPIV.
OrthoDBiEOG7DJSRB.
PhylomeDBiQ18428.

Miscellaneous databases

NextBioi920254.
PROiQ18428.

Family and domain databases

InterProiIPR000609. 7TM_GPCR_serpentine_rcpt_Srg.
[Graphical view]
PfamiPF02118. Srg. 1 hit.
[Graphical view]
PRINTSiPR00698. TMPROTEINSRG.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiSRG15_CAEEL
AccessioniPrimary (citable) accession number: Q18428
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 25, 2005
Last sequence update: June 1, 2003
Last modified: November 11, 2015
This is version 83 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.