Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative pyridoxal phosphate-dependent transferase

Gene

CD630_27330

Organism
Peptoclostridium difficile (strain 630) (Clostridium difficile)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

TransferaseImported

Enzyme and pathway databases

BioCyciCDIF272563:GJFE-2962-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative pyridoxal phosphate-dependent transferaseImported
Gene namesi
Ordered Locus Names:CD630_27330Imported
OrganismiPeptoclostridium difficile (strain 630) (Clostridium difficile)Imported
Taxonomic identifieri272563 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaePeptoclostridium
Proteomesi
  • UP000001978 Componenti: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei235 – 2351N6-(pyridoxal phosphate)lysineCombined sources

Interactioni

Protein-protein interaction databases

STRINGi272563.CD2733.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4DGTX-ray1.55A/B1-388[»]
4DQ6X-ray1.50A/B1-388[»]
ProteinModelPortaliQ183G9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini58 – 383326Aminotran_1_2InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4105C87. Bacteria.
COG1168. LUCA.
HOGENOMiHOG000223048.
KOiK14155.
OMAiYIEDNAQ.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR027619. C_S_lyase_PatB.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR04350. C_S_lyase_PatB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q183G9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNYNFNEIVD RSNNFSSKWS EMEKKYGTND LLPMWVADMD FKAAPCIIDS
60 70 80 90 100
LKNRLEQEIY GYTTRPDSYN ESIVNWLYRR HNWKIKSEWL IYSPGVIPAI
110 120 130 140 150
SLLINELTKA NDKIMIQEPV YSPFNSVVKN NNRELIISPL QKLENGNYIM
160 170 180 190 200
DYEDIENKIK DVKLFILCNP HNPVGRVWTK DELKKLGDIC LKHNVKIISD
210 220 230 240 250
EIHSDIILKK HKHIPMASIS KEFEKNTITC MAPTKTFNIA GLQSSYVVLP
260 270 280 290 300
DEKDYKLLDD AFTRIDIKRN NCFSLVATEA SYNNGESWLE SFLEYLESNI
310 320 330 340 350
DFAIKYINEN MPKLKVRKPE GTYLLWVDFS ALGLSDEELE SILVQKGKVA
360 370 380
LNQGNSFGIG GSGYQRINLA CPRSMLEEAL IRIKNAIN
Length:388
Mass (Da):44,760
Last modified:July 25, 2006 - v1
Checksum:iCB68E51EC5F4111A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ69620.1.
RefSeqiWP_011861662.1. NZ_CP010905.1.
YP_001089245.1. NC_009089.1.

Genome annotation databases

EnsemblBacteriaiCAJ69620; CAJ69620; CD630_27330.
GeneIDi4915418.
KEGGicdf:CD630_27330.
pdc:CDIF630_02995.
PATRICi19443953. VBICloDif38397_2860.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ69620.1.
RefSeqiWP_011861662.1. NZ_CP010905.1.
YP_001089245.1. NC_009089.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4DGTX-ray1.55A/B1-388[»]
4DQ6X-ray1.50A/B1-388[»]
ProteinModelPortaliQ183G9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272563.CD2733.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ69620; CAJ69620; CD630_27330.
GeneIDi4915418.
KEGGicdf:CD630_27330.
pdc:CDIF630_02995.
PATRICi19443953. VBICloDif38397_2860.

Phylogenomic databases

eggNOGiENOG4105C87. Bacteria.
COG1168. LUCA.
HOGENOMiHOG000223048.
KOiK14155.
OMAiYIEDNAQ.

Enzyme and pathway databases

BioCyciCDIF272563:GJFE-2962-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR027619. C_S_lyase_PatB.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR04350. C_S_lyase_PatB. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ183G9_PEPD6
AccessioniPrimary (citable) accession number: Q183G9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: September 7, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.