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Protein
Submitted name:

Uncharacterized protein

Gene

C32C4.1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ion channel, Potassium channelSAAS annotation, Voltage-gated channelSAAS annotation

Keywords - Biological processi

Ion transport, Potassium transport, Transport

Keywords - Ligandi

Potassium

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:C32C4.1Imported, CELE_C32C4.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC32C4.1a; CE37877; WBGene00007862.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei211 – 234HelicalSequence analysisAdd BLAST24
Transmembranei295 – 314HelicalSequence analysisAdd BLAST20
Transmembranei397 – 418HelicalSequence analysisAdd BLAST22
Transmembranei458 – 479HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ18351.

Expressioni

Gene expression databases

BgeeiWBGene00007862.
ExpressionAtlasiQ18351. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi6239.C32C4.1b.

Structurei

3D structure databases

ProteinModelPortaliQ18351.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini63 – 169BTB (POZ)InterPro annotationAdd BLAST107

Sequence similaritiesi

Belongs to the potassium channel family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3713. Eukaryota.
COG1226. LUCA.
GeneTreeiENSGT00860000134003.
HOGENOMiHOG000272628.

Family and domain databases

Gene3Di1.20.120.350. 1 hit.
InterProiIPR000210. BTB/POZ_dom.
IPR027359. Channel_four-helix_dom.
IPR005821. Ion_trans_dom.
IPR003968. K_chnl_volt-dep_Kv.
IPR003971. K_chnl_volt-dep_Kv9.
IPR011333. SKP1/BTB/POZ.
IPR003131. T1-type_BTB.
IPR028325. VG_K_chnl.
[Graphical view]
PANTHERiPTHR11537. PTHR11537. 3 hits.
PfamiPF02214. BTB_2. 1 hit.
PF00520. Ion_trans. 1 hit.
[Graphical view]
PRINTSiPR00169. KCHANNEL.
PR01494. KV9CHANNEL.
PR01491. KVCHANNEL.
SMARTiSM00225. BTB. 1 hit.
[Graphical view]
SUPFAMiSSF54695. SSF54695. 1 hit.

Sequencei

Sequence statusi: Complete.

Q18351-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFSSVSKSNL NVAKIAKQQR LQAEENAAVQ AASMERRVAF RPPPIGESRS
60 70 80 90 100
TTITHDSGSN ADTYMRLNVG GKSYYVRAEL YTSEWTRMHE LLDSSHEERL
110 120 130 140 150
KMVDGFDSKT GEYYLERNAK LTDHVMDFFV TGSLHKPQNV CVERFKEELE
160 170 180 190 200
YWKIKPDQLS TCCQIPSEHH VRKLSRGTSF NEDDYVTDFD GACFAGPRLA
210 220 230 240 250
MWKFLEDPQS SVFAAVFALL SVFFVFASVV GLILGSMPEF QADSSNAATY
260 270 280 290 300
HVMHVRSRPN DYGNKFGNDD DVAPNELLKD FVYKPTDSPN LPLTILEYIC
310 320 330 340 350
IGWFTFEYLV RFTIYPRKRQ FVKKTLNIID LSTILPFYLE ICLPLFGVES
360 370 380 390 400
RLKEFTGAML VVRVLRVLRM ARVFKLARYS TSLQTFGHTL QSSITELSML
410 420 430 440 450
SMFLITGIVF FSTIMYYLEK DEPHTDFYSI PAGCWWCVVT MATVGYGDAK
460 470 480 490 500
PVTTLGKLVA TSTSICGIIV LAFPISMIVE KFATAQQRAI EDQQIQQAQM
510 520
SAVANNALLR RFPTRRKVRR NTTVSVNNI
Length:529
Mass (Da):60,125
Last modified:March 1, 2005 - v3
Checksum:iD48BA24DB1E33559
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAA98109.3.
PIRiT19635.
RefSeqiNP_505725.3. NM_073324.4.
UniGeneiCel.4612.

Genome annotation databases

EnsemblMetazoaiC32C4.1a; C32C4.1a; WBGene00007862.
GeneIDi183120.
UCSCiC32C4.1a. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAA98109.3.
PIRiT19635.
RefSeqiNP_505725.3. NM_073324.4.
UniGeneiCel.4612.

3D structure databases

ProteinModelPortaliQ18351.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C32C4.1b.

Proteomic databases

PaxDbiQ18351.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC32C4.1a; C32C4.1a; WBGene00007862.
GeneIDi183120.
UCSCiC32C4.1a. c. elegans.

Organism-specific databases

CTDi183120.
WormBaseiC32C4.1a; CE37877; WBGene00007862.

Phylogenomic databases

eggNOGiKOG3713. Eukaryota.
COG1226. LUCA.
GeneTreeiENSGT00860000134003.
HOGENOMiHOG000272628.

Gene expression databases

BgeeiWBGene00007862.
ExpressionAtlasiQ18351. baseline and differential.

Family and domain databases

Gene3Di1.20.120.350. 1 hit.
InterProiIPR000210. BTB/POZ_dom.
IPR027359. Channel_four-helix_dom.
IPR005821. Ion_trans_dom.
IPR003968. K_chnl_volt-dep_Kv.
IPR003971. K_chnl_volt-dep_Kv9.
IPR011333. SKP1/BTB/POZ.
IPR003131. T1-type_BTB.
IPR028325. VG_K_chnl.
[Graphical view]
PANTHERiPTHR11537. PTHR11537. 3 hits.
PfamiPF02214. BTB_2. 1 hit.
PF00520. Ion_trans. 1 hit.
[Graphical view]
PRINTSiPR00169. KCHANNEL.
PR01494. KV9CHANNEL.
PR01491. KVCHANNEL.
SMARTiSM00225. BTB. 1 hit.
[Graphical view]
SUPFAMiSSF54695. SSF54695. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ18351_CAEEL
AccessioniPrimary (citable) accession number: Q18351
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: March 1, 2005
Last modified: November 30, 2016
This is version 132 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.