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Protein

Histone H1.X

Gene

hil-1

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • body morphogenesis Source: WormBase
  • locomotion Source: WormBase
  • multicellular organism growth Source: WormBase
  • nucleosome assembly Source: InterPro
  • oviposition Source: WormBase
  • pharynx development Source: WormBase
Complete GO annotation...

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Histone H1.X
Alternative name(s):
Histone H1-like protein 1
Gene namesi
Name:hil-1
ORF Names:C30G7.1
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC30G7.1; CE08476; WBGene00001852; hil-1.

Subcellular locationi

  • Nucleus PROSITE-ProRule annotation
  • Chromosome PROSITE-ProRule annotation

GO - Cellular componenti

  • intermediate filament cytoskeleton Source: WormBase
  • nucleolus Source: WormBase
  • nucleosome Source: InterPro
  • nucleus Source: WormBase
Complete GO annotation...

Keywords - Cellular componenti

Chromosome, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 232232Histone H1.XPRO_0000195987Add
BLAST

Proteomic databases

EPDiQ18336.
PaxDbiQ18336.
PRIDEiQ18336.

Expressioni

Gene expression databases

BgeeiWBGene00001852.

Interactioni

Protein-protein interaction databases

STRINGi6239.C30G7.1.

Structurei

3D structure databases

ProteinModelPortaliQ18336.
SMRiQ18336. Positions 37-112.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini36 – 11277H15PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the histone H1/H5 family.PROSITE-ProRule annotation
Contains 1 H15 (linker histone H1/H5 globular) domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG4012. Eukaryota.
ENOG4112541. LUCA.
GeneTreeiENSGT00730000111466.
HOGENOMiHOG000019508.
InParanoidiQ18336.
OMAiRTGTRKS.
OrthoDBiEOG091G0LIU.
PhylomeDBiQ18336.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005818. Histone_H1/H5_H15.
IPR005819. Histone_H5.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00538. Linker_histone. 1 hit.
[Graphical view]
PRINTSiPR00624. HISTONEH5.
SMARTiSM00526. H15. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS51504. H15. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q18336-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTSLIHMAN HLDASTEEIS LNYVLLGHPH HERAQHHPSY MDMIKGAIQA
60 70 80 90 100
IDNGTGSSKA AILKYIAQNY HVGENLPKVN NHLRSVLKKA VDSGDIEQTR
110 120 130 140 150
GHGATGSFRM GKECEKNLQV GIPVQTKPML MLKEVRQKLE NISKAEKTKP
160 170 180 190 200
STSSMSTNKK GKPISTMKKR GVMSKKRSSK NKMAPKAKSH GLKKKGPATK
210 220 230
SSGLVHKAAG AKNEAAPTTK MELRTGTRKS YC
Length:232
Mass (Da):25,362
Last modified:November 1, 1996 - v1
Checksum:iFEA897B6FEEBBD4B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF002679 mRNA. Translation: AAB60893.1.
Z78239 Genomic DNA. Translation: CAB01632.1.
PIRiT19583.
RefSeqiNP_506680.1. NM_074279.5.
UniGeneiCel.19692.

Genome annotation databases

EnsemblMetazoaiC30G7.1; C30G7.1; WBGene00001852.
GeneIDi179993.
KEGGicel:CELE_C30G7.1.
UCSCiC30G7.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF002679 mRNA. Translation: AAB60893.1.
Z78239 Genomic DNA. Translation: CAB01632.1.
PIRiT19583.
RefSeqiNP_506680.1. NM_074279.5.
UniGeneiCel.19692.

3D structure databases

ProteinModelPortaliQ18336.
SMRiQ18336. Positions 37-112.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C30G7.1.

Proteomic databases

EPDiQ18336.
PaxDbiQ18336.
PRIDEiQ18336.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC30G7.1; C30G7.1; WBGene00001852.
GeneIDi179993.
KEGGicel:CELE_C30G7.1.
UCSCiC30G7.1. c. elegans.

Organism-specific databases

CTDi179993.
WormBaseiC30G7.1; CE08476; WBGene00001852; hil-1.

Phylogenomic databases

eggNOGiKOG4012. Eukaryota.
ENOG4112541. LUCA.
GeneTreeiENSGT00730000111466.
HOGENOMiHOG000019508.
InParanoidiQ18336.
OMAiRTGTRKS.
OrthoDBiEOG091G0LIU.
PhylomeDBiQ18336.

Miscellaneous databases

PROiQ18336.

Gene expression databases

BgeeiWBGene00001852.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005818. Histone_H1/H5_H15.
IPR005819. Histone_H5.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00538. Linker_histone. 1 hit.
[Graphical view]
PRINTSiPR00624. HISTONEH5.
SMARTiSM00526. H15. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS51504. H15. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiH1X_CAEEL
AccessioniPrimary (citable) accession number: Q18336
Secondary accession number(s): O02556
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.