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Protein
Submitted name:

Arginyl(R) Amino-acyl tRNA Synthetase

Gene

rars-2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetaseUniRule annotationImported, Ligase

Keywords - Biological processi

Protein biosynthesisUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Arginyl(R) Amino-acyl tRNA SynthetaseImported
Gene namesi
Name:rars-2Imported
ORF Names:C29H12.1Imported, CELE_C29H12.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiC29H12.1; CE17479; WBGene00004680; rars-2.

PTM / Processingi

Proteomic databases

EPDiQ18316.
PaxDbiQ18316.
PRIDEiQ18316.

Interactioni

Protein-protein interaction databases

STRINGi6239.C29H12.1.

Structurei

3D structure databases

ProteinModelPortaliQ18316.
SMRiQ18316. Positions 32-512.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini393 – 512120DALR_1InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1195. Eukaryota.
COG0018. LUCA.
GeneTreeiENSGT00530000063407.
HOGENOMiHOG000016968.
InParanoidiQ18316.
KOiK01887.
OMAiFRSTVIG.
OrthoDBiEOG7DNNTT.
PhylomeDBiQ18316.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
3.40.50.620. 1 hit.
InterProiIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiPF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSiPR01038. TRNASYNTHARG.
SMARTiSM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMiSSF47323. SSF47323. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.
PROSITEiPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q18316-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGEVCVQTL HRLRQIGSFR SIVEQKYRTV GKSQRIVVDF SSPNIAKQFH
60 70 80 90 100
VGNLRSTLIG RYVDKVSRVM GNEVTSVNYL GDWGTQFAMI AAFWPQMRPS
110 120 130 140 150
DQYWNSLSDV EKIKQLTDCY VVANKNMKID EEFRAKVYET FVAMEKAVTG
160 170 180 190 200
EQENWKNDEH MMLWQQIKDI SKNHLSEFYN LFDVKFDKWL CESSQVRKAH
210 220 230 240 250
QYAQELIDKG FTEDLDGKTI FRLRDIDTEK KQSDGVNYAV LRKSDMSSLY
260 270 280 290 300
LTREIAAILD RDAMFQADRY LYVVDRAQRQ HFKALKVILE KIGRSDLASK
310 320 330 340 350
IEHIQYGRVR GLSTRNGRTE AVGEIIEKGR ELALQFMKSS KTFCMDPAVE
360 370 380 390 400
SDIANVLSLS TVVFNELKRA RNSEYEFSFQ NAFALNQNNA LALQMKHSRL
410 420 430 440 450
SSIEEKHQHL FPQIEACTKF NDFDTNDDVK RLIRLLNDLE KAVELSAEKL
460 470 480 490 500
EACQLTVQLI HVAAAAGSVQ KQLRVKDQPD EVAVPRLLLF SAVRNVLAEG
510
LRFLGITPAR SM
Length:512
Mass (Da):58,856
Last modified:December 1, 2001 - v2
Checksum:iB3C0F61B12373780
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD66104.1.
PIRiT15704.
RefSeqiNP_495227.1. NM_062826.3.
UniGeneiCel.6788.

Genome annotation databases

EnsemblMetazoaiC29H12.1; C29H12.1; WBGene00004680.
GeneIDi174023.
KEGGicel:CELE_C29H12.1.
UCSCiC29H12.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD66104.1.
PIRiT15704.
RefSeqiNP_495227.1. NM_062826.3.
UniGeneiCel.6788.

3D structure databases

ProteinModelPortaliQ18316.
SMRiQ18316. Positions 32-512.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C29H12.1.

Proteomic databases

EPDiQ18316.
PaxDbiQ18316.
PRIDEiQ18316.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC29H12.1; C29H12.1; WBGene00004680.
GeneIDi174023.
KEGGicel:CELE_C29H12.1.
UCSCiC29H12.1. c. elegans.

Organism-specific databases

CTDi174023.
WormBaseiC29H12.1; CE17479; WBGene00004680; rars-2.

Phylogenomic databases

eggNOGiKOG1195. Eukaryota.
COG0018. LUCA.
GeneTreeiENSGT00530000063407.
HOGENOMiHOG000016968.
InParanoidiQ18316.
KOiK01887.
OMAiFRSTVIG.
OrthoDBiEOG7DNNTT.
PhylomeDBiQ18316.

Miscellaneous databases

NextBioi882171.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
3.40.50.620. 1 hit.
InterProiIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiPF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSiPR01038. TRNASYNTHARG.
SMARTiSM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMiSSF47323. SSF47323. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.
PROSITEiPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ18316_CAEEL
AccessioniPrimary (citable) accession number: Q18316
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: December 1, 2001
Last modified: May 11, 2016
This is version 122 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.