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Protein
Submitted name:

FUS/TLS RNA binding protein homolog

Gene

fust-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
FUS/TLS RNA binding protein homologImported
Gene namesi
Name:fust-1Imported
ORF Names:C27H5.3Imported, CELE_C27H5.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiC27H5.3a; CE27099; WBGene00016173; fust-1.

PTM / Processingi

Proteomic databases

EPDiQ18265.
PaxDbiQ18265.
PeptideAtlasiQ18265.

Expressioni

Gene expression databases

BgeeiWBGene00016173.

Interactioni

Protein-protein interaction databases

STRINGi6239.C27H5.3.2.

Structurei

3D structure databases

ProteinModelPortaliQ18265.
SMRiQ18265.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini201 – 287RRMInterPro annotationAdd BLAST87
Domaini396 – 425RanBP2-typeInterPro annotationAdd BLAST30

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1995. Eukaryota.
ENOG4111GEG. LUCA.
GeneTreeiENSGT00730000113697.
InParanoidiQ18265.
KOiK14651.
OMAiDSYNKGP.
OrthoDBiEOG091G0U8W.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiView protein in InterPro
IPR012677. Nucleotide-bd_a/b_plait_sf.
IPR035979. RBD_domain_sf.
IPR000504. RRM_dom.
IPR034870. TET_fam.
IPR001876. Znf_RanBP2.
IPR036443. Znf_RanBP2_sf.
PANTHERiPTHR23238. PTHR23238. 2 hits.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
PF00641. zf-RanBP. 1 hit.
SMARTiView protein in SMART
SM00360. RRM. 1 hit.
SM00547. ZnF_RBZ. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.
SSF90209. SSF90209. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.
PS01358. ZF_RANBP2_1. 1 hit.
PS50199. ZF_RANBP2_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q18265-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAYDQSQPD YSTPEGQQAY WAYYQQQQQQ QPGGQPDQDP YAAAAYGGHD
60 70 80 90 100
QAQQPQNPYA PPPPGADPYG QGSGGQSGGS DPYGQSRGGG RGGFGGSRGG
110 120 130 140 150
GGYDGGRGGS RGGYDGGRGG YGGDRGGRGG GRGGYDGERR GGSRWDDGNS
160 170 180 190 200
DRQGGPPGGR GGYQDRGPRR DGPPSGGGYG GGGAASGNRE FGSDGRVELK
210 220 230 240 250
ETVFVQGIST TANEAYIADV FSTCGDIAKN DRGPRIKIYT DRNTGEPKGE
260 270 280 290 300
CMITFVDASA AQQAITMYNG QPFPGGSSPM SISLAKFRAD AGGERGGRGG
310 320 330 340 350
RGGFGGGRGG PMGGRGGFGG DRGGYGGGGG RGGFDGGRGG GGGFRGGDRG
360 370 380 390 400
GFRGGDRGGF RGGDRGGFRG GDRGGDRGGF RGGRGVGGGN ANMEQRKNDW
410 420 430 440
PCEQCGNSNF AFRRECNQCQ APRPDGGSGG GGGERRGGPP GGDRYRPY
Length:448
Mass (Da):45,194
Last modified:October 1, 2001 - v2
Checksum:i7BE96D641520F456
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD65889.1.
PIRiT15667.
RefSeqiNP_495483.1. NM_063082.4.
UniGeneiCel.15774.

Genome annotation databases

EnsemblMetazoaiC27H5.3a.1; C27H5.3a.1; WBGene00016173.
C27H5.3a.2; C27H5.3a.2; WBGene00016173.
GeneIDi174175.
KEGGicel:CELE_C27H5.3.
UCSCiC27H5.3.1. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiQ18265_CAEEL
AccessioniPrimary (citable) accession number: Q18265
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: October 1, 2001
Last modified: March 28, 2018
This is version 132 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported