Q180F8 (Q180F8_CLOD6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Iron hydrogenase EMBL CAJ70211.1
EC=1.12.7.2 EMBL CAJ70211.1

Gene names

Name:	hydA EMBL CAJ70211.1
Ordered Locus Names:	CD630_33140

Organism

Clostridium difficile (strain 630) [Complete proteome] [HAMAP]

Taxonomic identifier

272563 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	461 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL CAJ70211.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	electron carrier activity Inferred from electronic annotation. Source: InterPro ferredoxin hydrogenase activity Inferred from electronic annotation. Source: EC iron ion binding Inferred from electronic annotation. Source: InterPro iron-sulfur cluster binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q180F8 [UniParc]. Last modified July 25, 2006. Version 1. Checksum: 1CEAD3CC0A2C63BB	FASTA	461	51,232
	10 20 30 40 50 60 MTFMIINIDK DLCTGCRECS KVCPVNAIEG EEGKPQEINL DRCVMCGQCV QTCKSYASVI 70 80 90 100 110 120 DEGFEFLQEK KQEREIPESI NEPIFAAYNV CDIDKVKKAL SDPNVFTMVQ CAPAVRVALG 130 140 150 160 170 180 EDFGYYLGYL GAGKMAAALR ALNFDRVYDT NFAADLTIME EGSELIKRVT EGGTLPMFTS 190 200 210 220 230 240 CCPAWVKFME KNYPKLTNHL SSCKSPQQMG GAIFKTYGAE INNVDASKIF SVSIMPCTCK 250 260 270 280 290 300 KYECDREEMD SSGYRDVDVV LTTRELAYLI KDMGIDFKNL REEKFDSPLG SYSGAGTIFG 310 320 330 340 350 360 VTGGVMEAAI RTGYELITGE SIPDVEVKQV RGENGFRKST IKIGDLDLRV GVVSGLKNVI 370 380 390 400 410 420 PVLEDLEKGK LDVDFIEVMT CPVGCVSGGG QPKILLEEYK ELAYENRTKA TYVHDEHLAI 430 440 450 460 RKSHENPDIK KLYDEYLVEP LGEKSHHLLH TTYCIGKEVA K

References

[1]

"The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome." Sebaihia M., Wren B.W., Mullany P., Fairweather N.F., Minton N., Stabler R., Thomson N.R., Roberts A.P., Cerdeno-Tarraga A.M., Wang H., Holden M.T.G., Wright A., Churcher C., Quail M.A., Baker S., Bason N., Brooks K., Chillingworth T. , Cronin A., Davis P., Dowd L., Fraser A., Feltwell T., Hance Z., Holroyd S., Jagels K., Moule S., Mungall K., Price C., Rabbinowitsch E., Sharp S., Simmonds M., Stevens K., Unwin L., Whithead S., Dupuy B., Dougan G., Barrell B., Parkhill J. Nat. Genet. 38:779-786(2006) [PubMed: 16804543] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 630.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM180355 Genomic DNA. Translation: CAJ70211.1.
RefSeq	YP_001089830.1. NC_009089.1.
3D structure databases
ProteinModelPortal	Q180F8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q180F8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4912935.
GenomeReviews	Gene locus CD3314 in contig AM180355_GR.
KEGG	cdf:CD3314.
NMPDR	fig|1496.1.peg.949.
PATRIC	19445169. VBICloDif38397_3468.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4624.
HOGENOM	HBG305296.
OMA	RVYDTNF.
ProtClustDB	CLSK928490.
Family and domain databases
InterPro	IPR001450. 4Fe4S-bd_dom. IPR017896. 4Fe4S_Fe-S-bd. IPR017900. 4Fe4S_Fe_S_CS. IPR009016. Fe_hydrogenase. IPR004108. Fe_hydrogenase_lsu_C. IPR003149. Fe_hydrogenase_ssu-like. IPR013352. Fe_hydrogenase_subset. [Graphical view]
Gene3D	G3DSA:4.10.260.20. Fe_hyd_ssu-like. 1 hit.
KO	K00532.
Pfam	PF02906. Fe_hyd_lg_C. 1 hit. PF02256. Fe_hyd_SSU. 1 hit. PF12838. Fer4_7. 1 hit. [Graphical view]
SMART	SM00902. Fe_hyd_SSU. 1 hit. [Graphical view]
SUPFAM	SSF53920. Fe_hydrog. 1 hit.
TIGRFAMs	TIGR02512. Fe_only_hydrog. 1 hit.
PROSITE	PS00198. 4FE4S_FER_1. 1 hit. PS51379. 4FE4S_FER_2. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q180F8_CLOD6

Accession

Primary (citable) accession number: Q180F8

Entry history

Integrated into UniProtKB/TrEMBL:	July 25, 2006
Last sequence update:	July 25, 2006
Last modified:	December 14, 2011
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)