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Q18006 (SOX_CAEEL) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative sarcosine oxidase
EC=1.5.3.1
Gene names
ORF Names:C15B12.1
OrganismCaenorhabditis elegans
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length384 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Sarcosine + H2O + O2 = glycine + formaldehyde + H2O2.

Cofactor

Binds 1 FAD per subunit By similarity.

Sequence similarities

Belongs to the MSOX/MTOX family.

Ontologies

Keywords
   LigandFAD
Flavoprotein
   Molecular functionOxidoreductase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular functionsarcosine oxidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 384384Putative sarcosine oxidase
PRO_0000213776

Regions

Nucleotide binding6 – 3631FAD Potential

Amino acid modifications

Modified residue3151S-8alpha-FAD cysteine Probable

Sequences

Sequence LengthMass (Da)Tools
Q18006 [UniParc].

Last modified January 23, 2002. Version 2.
Checksum: DB0BF3156F51A6C2

FASTA38443,123
        10         20         30         40         50         60 
MSTDYDVVVV GAGIFGSCTA YNCQKIGLKT LLLEQFELGH KNGSSHGKSR ITRYAHTEVE 

        70         80         90        100        110        120 
YVDLVGDAYN QIFELERIRG EKLWKKTGLL WVSTGNEVEK IHTNLKLKGI KHEVIKGTEV 

       130        140        150        160        170        180 
GKRYPQFKFD DSWNGLIDPM GGVIYADKWL NAFRDEFKKI GGIIHDREIV LSHSEISNNL 

       190        200        210        220        230        240 
FVTTNKSRYS SKKIIFTVGC WITKFLPDLK FNIEPISISV CYWKTKNESD SHLLNEDHYP 

       250        260        270        280        290        300 
VVIAQEMDLQ VFHYSLPDTD YPGSMKFCYH FGDALTQDLA HPAQRSQRCI DLPAKFIQKY 

       310        320        330        340        350        360 
MPVVDGSAPT RIDKCIYTNS PDDHYIIGTI PTKNPNILVG GCGSGSGFKV APGIGKALAE 

       370        380 
MAAGKKTTVD VSFFSANRFK PSKI

« Hide

References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FO080547 Genomic DNA. Translation: CCD64563.1.
RefSeqNP_509092.2. NM_076691.3.
UniGeneCel.20177.

3D structure databases

ProteinModelPortalQ18006.
SMRQ18006. Positions 1-384.
ModBaseSearch...

Proteomic databases

PRIDEQ18006.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaC15B12.1; C15B12.1; C15B12.1.
GeneID180921.
KEGGcel:C15B12.1.
NMPDRfig|6239.3.peg.23552.
UCSCC15B12.1. c. elegans.

Organism-specific databases

CTD180921.
WormBaseC15B12.1; CE29665; WBGene00015783.

Phylogenomic databases

eggNOGmeNOG10374.
GeneTreeEMGT00050000012083.
HOGENOMHBG589227.
InParanoidQ18006.
OMAEERDCPA.
PhylomeDBQ18006.

Gene expression databases

ArrayExpressQ18006.

Family and domain databases

InterProIPR006076. FAD-dep_OxRdtase.
[Graphical view]
PfamPF01266. DAO. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio911556.

Entry information

Entry nameSOX_CAEEL
AccessionPrimary (citable) accession number: Q18006
Entry history
Integrated into UniProtKB/Swiss-Prot: January 23, 2002
Last sequence update: January 23, 2002
Last modified: December 14, 2011
This is version 71 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Relevant documents

Caenorhabditis elegans

Caenorhabditis elegans: entries, gene names and cross-references to WormPep

SIMILARITY comments

Index of protein domains and families

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