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Protein
Submitted name:

Polysaccharide deacetylase

Gene

CD630_32480

Organism
Peptoclostridium difficile (strain 630) (Clostridium difficile)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciPDIF272563:G12WB-3415-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Polysaccharide deacetylaseImported
Gene namesi
Ordered Locus Names:CD630_32480Imported
OrganismiPeptoclostridium difficile (strain 630) (Clostridium difficile)Imported
Taxonomic identifieri272563 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaeClostridioides
Proteomesi
  • UP000001978 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 32HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi272563.CD3248.

Structurei

3D structure databases

ProteinModelPortaliQ17ZZ1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini54 – 231NodB homologyInterPro annotationAdd BLAST178

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4108NMV. Bacteria.
ENOG41112BD. LUCA.
HOGENOMiHOG000260719.
OMAiGCIYNQK.

Family and domain databases

Gene3Di3.20.20.370. 1 hit.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR002509. NODB_dom.
[Graphical view]
PfamiPF01522. Polysacc_deac_1. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.
PROSITEiPS51677. NODB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q17ZZ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKREVKRTKA LIYSVLFFSL LLVLIFVFVY GIKYICSKSD NSKMPIYKVD
60 70 80 90 100
TNEKKIALSF DVAWGTDNMD DILKILDKHN VKATFFLVGS WVDDNEEIVK
110 120 130 140 150
AIDEKGHEIG NHSNTHANLK EISKEDITKE IETTSEKIYN ITGKRTNLFR
160 170 180 190 200
PPFGDVNNKA MDICSDLGYK VIKWDVDSID WKELGPNHVI EKVIKESQPG
210 220 230 240 250
SIVLFHANIN DVDNYLDTII SRLKKDGYSL VKISDLLYKD NYVVDSNGVQ

KTKN
Length:254
Mass (Da):29,074
Last modified:July 25, 2006 - v1
Checksum:i249C12C3AFFD2044
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ70145.1.
RefSeqiWP_009898387.1. NZ_CP010905.1.
YP_001089764.1. NC_009089.1.

Genome annotation databases

EnsemblBacteriaiCAJ70145; CAJ70145; CD630_32480.
GeneIDi4916572.
KEGGicdf:CD630_32480.
pdc:CDIF630_03545.
PATRICi19445035. VBICloDif38397_3401.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180355 Genomic DNA. Translation: CAJ70145.1.
RefSeqiWP_009898387.1. NZ_CP010905.1.
YP_001089764.1. NC_009089.1.

3D structure databases

ProteinModelPortaliQ17ZZ1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272563.CD3248.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ70145; CAJ70145; CD630_32480.
GeneIDi4916572.
KEGGicdf:CD630_32480.
pdc:CDIF630_03545.
PATRICi19445035. VBICloDif38397_3401.

Phylogenomic databases

eggNOGiENOG4108NMV. Bacteria.
ENOG41112BD. LUCA.
HOGENOMiHOG000260719.
OMAiGCIYNQK.

Enzyme and pathway databases

BioCyciPDIF272563:G12WB-3415-MONOMER.

Family and domain databases

Gene3Di3.20.20.370. 1 hit.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR002509. NODB_dom.
[Graphical view]
PfamiPF01522. Polysacc_deac_1. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.
PROSITEiPS51677. NODB. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ17ZZ1_PEPD6
AccessioniPrimary (citable) accession number: Q17ZZ1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: November 2, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.