Q17ZX0 (Q17ZX0_CLOD6) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 47.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: Dihydrodipicolinate synthase 3 EMBL CAJ70123.1 EC=4.2.1.52 EMBL CAJ70123.1 | ||||
| Gene names |
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| Organism | Clostridium difficile (strain 630) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 272563 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium |
Protein attributes
| Sequence length | 295 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O. SAAS SAAS005263 |
| Pathway | Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4. SAAS SAAS005263 |
| Subcellular location | Cytoplasm By similarity SAAS SAAS005263. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Diaminopimelate biosynthesis SAAS SAAS005263 Lysine biosynthesis SAAS SAAS005263 |
| Cellular component | Cytoplasm SAAS SAAS005263 |
| Ligand | Schiff base SAAS SAAS005263 |
| Molecular function | Lyase SAAS SAAS005263 EMBL CAJ70123.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | diaminopimelate biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: HAMAP |
| Molecular function | dihydrodipicolinate synthase activity Inferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequences
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References
| [1] | "The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome." Sebaihia M., Wren B.W., Mullany P., Fairweather N.F., Minton N., Stabler R., Thomson N.R., Roberts A.P., Cerdeno-Tarraga A.M., Wang H., Holden M.T.G., Wright A., Churcher C., Quail M.A., Baker S., Bason N., Brooks K., Chillingworth T. Parkhill J.Nat. Genet. 38:779-786(2006) [PubMed: 16804543] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 630. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AM180355 Genomic DNA. Translation: CAJ70123.1. |
| RefSeq | YP_001089742.1. NC_009089.1. |
3D structure databases | |
| ProteinModelPortal | Q17ZX0. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q17ZX0. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 4915232. |
| GenomeReviews | Gene locus CD3225 in contig AM180355_GR. |
| KEGG | cdf:CD3225. |
| NMPDR | fig|1496.1.peg.856. |
| PATRIC | 19444989. VBICloDif38397_3378. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0329. |
| HOGENOM | HBG358848. |
| OMA | AVKDCAY. |
| ProtClustDB | CLSK735736. |
Family and domain databases | |
| InterPro | IPR013785. Aldolase_TIM. IPR002220. Dihydrodipicolinate_synth-like. IPR020625. Dihydrodipicolinate_synth_AS. IPR020624. Dihydrodipicolinate_synth_CS. IPR005263. Dihydrodipicolinate_synth_DapA. [Graphical view] |
| Gene3D | G3DSA:3.20.20.70. Aldolase_TIM. 1 hit. |
| KO | K01714. |
| PANTHER | PTHR12128. DHDPS. 1 hit. |
| Pfam | PF00701. DHDPS. 1 hit. [Graphical view] |
| PIRSF | PIRSF001365. DHDPS. 1 hit. |
| PRINTS | PR00146. DHPICSNTHASE. |
| TIGRFAMs | TIGR00674. DapA. 1 hit. |
| PROSITE | PS00665. DHDPS_1. 1 hit. PS00666. DHDPS_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q17ZX0_CLOD6 | ||||||||
| Accession | Primary (citable) accession number: Q17ZX0 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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