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Protein
Submitted name:

Ulcer-associated gene restriction endonuclease

Gene

Hac_0305

Organism
Helicobacter acinonychis (strain Sheeba)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

EndonucleaseImported, Hydrolase, Nuclease

Enzyme and pathway databases

BioCyciHACI382638:GJAU-288-MONOMER.

Protein family/group databases

REBASEi13244. HacSORF306P.

Names & Taxonomyi

Protein namesi
Submitted name:
Ulcer-associated gene restriction endonucleaseImported (EC:3.1.21.4Imported)
Gene namesi
Ordered Locus Names:Hac_0305Imported
OrganismiHelicobacter acinonychis (strain Sheeba)Imported
Taxonomic identifieri382638 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
ProteomesiUP000000775 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi382638.Hac_0305.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG47905.
HOGENOMiHOG000077331.
KOiK01155.
OMAiWSAKNIK.
OrthoDBiEOG6WQD6P.

Family and domain databases

InterProiIPR003615. HNH_nuc.
IPR007979. NlaIII/ICEA1.
[Graphical view]
PfamiPF05315. ICEA. 1 hit.
[Graphical view]
SMARTiSM00507. HNHc. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q17YX9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEFDKEQTPR NSIDRIRLNG YNTKCVFNQS IRQDIKNHYS QQCCAMCGVW
60 70 80 90 100
GNSENTQIEV DHKDGRKNDP RVSDLSMQTL DDFQALCKAC NDKKRQICKE
110 120 130 140 150
CKETGYRFDA TKILGNHYPF YEGEAEYDGC VGCYQYDPIQ YKKTCNDRIY
160 170
NEGYQKGYDE GYQIGYHQKT TL
Length:172
Mass (Da):20,163
Last modified:July 25, 2006 - v1
Checksum:i81E62C8367C13681
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM260522 Genomic DNA. Translation: CAJ99147.1.
RefSeqiWP_011577262.1. NC_008229.1.
YP_664146.1. NC_008229.1.

Genome annotation databases

EnsemblBacteriaiCAJ99147; CAJ99147; Hac_0305.
KEGGihac:Hac_0305.
PATRICi20584545. VBIHelAci71660_0299.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM260522 Genomic DNA. Translation: CAJ99147.1.
RefSeqiWP_011577262.1. NC_008229.1.
YP_664146.1. NC_008229.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi382638.Hac_0305.

Protein family/group databases

REBASEi13244. HacSORF306P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ99147; CAJ99147; Hac_0305.
KEGGihac:Hac_0305.
PATRICi20584545. VBIHelAci71660_0299.

Phylogenomic databases

eggNOGiNOG47905.
HOGENOMiHOG000077331.
KOiK01155.
OMAiWSAKNIK.
OrthoDBiEOG6WQD6P.

Enzyme and pathway databases

BioCyciHACI382638:GJAU-288-MONOMER.

Family and domain databases

InterProiIPR003615. HNH_nuc.
IPR007979. NlaIII/ICEA1.
[Graphical view]
PfamiPF05315. ICEA. 1 hit.
[Graphical view]
SMARTiSM00507. HNHc. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Who ate whom? Adaptive Helicobacter genomic changes that accompanied a host jump from early humans to large felines."
    Eppinger M., Baar C., Linz B., Raddatz G., Lanz C., Keller H., Morelli G., Gressmann H., Achtman M., Schuster S.C.
    PLoS Genet. 2:1097-1110(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SheebaImported.

Entry informationi

Entry nameiQ17YX9_HELAH
AccessioniPrimary (citable) accession number: Q17YX9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: April 1, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.