Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

HCG2004980, isoform CRA_e

Gene

PDZD4

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
HCG2004980, isoform CRA_eImported
Submitted name:
PDZ domain-containing protein 4Imported
Submitted name:
PDZD4 proteinImported
Gene namesi
Name:PDZD4Imported
ORF Names:hCG_2004980Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome X

Organism-specific databases

EuPathDBiHostDB:ENSG00000067840.12.
HGNCiHGNC:21167. PDZD4.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000067840.

Expressioni

Gene expression databases

BgeeiENSG00000067840.

Interactioni

Binary interactionsi

Show more details

Protein-protein interaction databases

IntActiQ17RL8. 13 interactors.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini136 – 205PDZInterPro annotationAdd BLAST70

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili398 – 425Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IT5C. Eukaryota.
ENOG4111F01. LUCA.
GeneTreeiENSGT00510000046421.
HOGENOMiHOG000231379.
HOVERGENiHBG053554.
OMAiRERCMKA.
OrthoDBiEOG091G0GKE.

Family and domain databases

InterProiView protein in InterPro
IPR001478. PDZ.
IPR036034. PDZ_sf.
PfamiView protein in Pfam
PF00595. PDZ. 1 hit.
SMARTiView protein in SMART
SM00228. PDZ. 1 hit.
SUPFAMiSSF50156. SSF50156. 1 hit.
PROSITEiView protein in PROSITE
PS50106. PDZ. 1 hit.

Sequencei

Sequence statusi: Complete.

Q17RL8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGCNMCVVQK PEEQYKVMLQ VNGKELSKLS QEQTLQALRS SKEPLVIQVL
60 70 80 90 100
RRSPRLRGDS SCHDLQLVDS GTQTDITFEH IMALGKLRPP TPPMVILEPY
110 120 130 140 150
VLSELPPISH EYYDPAEFME GGPQEADRLD ELEYEEVELY KSSHRDKLGL
160 170 180 190 200
MVCYRTDDEE DLGIYVGEVN PNSIAAKDGR IREGDRIIQI NGVDVQNREE
210 220 230 240 250
AVAILSQEEN TNISLLVARP ESQLAKRWKD SDRDDFLDDF GSENEGELRA
260 270 280 290 300
RKLKSPPAQQ PGNEEEKGAP DAGPGLSNSQ ELDSGVGRTD ESTRNEESSE
310 320 330 340 350
HDLLGDEPPS STNTPGSLRK FGLQGDALQS RDFHFSMDSL LAEGAGLGGG
360 370 380 390 400
DVPGLTDEEY ERYRELLEIK CHLENGNQLG LLFPRASGGN SALDVNRNES
410 420 430 440 450
LGHEMAMLEE ELRHLEFKCR NILRAQKMQQ LRERCMKAWL LEEESLYDLA
460 470 480 490 500
ASEPKKHELS DISELPEKSD KDSTSAYNTG ESCRSTPLLV EPLPESPLRR
510 520 530 540 550
AMAGNSNLNR TPPGPAVATP AKAAPPPGSP AKFRSLSRDP EAGRRQHAEE
560 570 580 590 600
RGRRNPKTGL TLERVGPESS PYLSRRHRGQ GQEGEHYHSC VQLAPTRGLE
610 620 630 640 650
ELGHGPLSLA GGPRVGGVAA AATEAPRMEW KVKVRSDGTR YVAKRPVRDR
660 670 680 690 700
LLKARALKIR EERSGMTTDD DAVSEMKMGR YWSKEERKQH LIRAREQRKR
710 720 730 740 750
REFMMQSRLE CLREQQNGDS KPELNIIALS HRKTMKKRNK KILDNWITIQ
760 770
EMLAHGARSA DGKRVYNPLL SVTTV
Length:775
Mass (Da):86,876
Last modified:July 25, 2006 - v1
Checksum:iA3C5A2A137801C95
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KF459511 Genomic DNA. No translation available.
U52111 Genomic DNA. No translation available.
BC117277 mRNA. Translation: AAI17278.1.
BC143545 mRNA. Translation: AAI43546.1.
CH471172 Genomic DNA. Translation: EAW72795.1.
RefSeqiNP_001290441.1. NM_001303512.1.
UniGeneiHs.92732.

Genome annotation databases

EnsembliENST00000393758; ENSP00000377355; ENSG00000067840.
GeneIDi57595.
UCSCiuc004fja.1. human.

Similar proteinsi

Entry informationi

Entry nameiQ17RL8_HUMAN
AccessioniPrimary (citable) accession number: Q17RL8
Entry historyiIntegrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: October 25, 2017
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported