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Protein
Submitted name:

Wolf-Hirschhorn syndrome candidate 1-like 1

Gene

WHSC1L1

Organism
Bos taurus (Bovine)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Wolf-Hirschhorn syndrome candidate 1-like 1Imported
Gene namesi
Name:WHSC1L1Imported
OrganismiBos taurus (Bovine)Imported
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos

PTM / Processingi

Proteomic databases

PRIDEiQ17R02.

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000053526.

Structurei

3D structure databases

ProteinModelPortaliQ17R02.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2940.
HOGENOMiHOG000122572.
HOVERGENiHBG083110.

Family and domain databases

InterProiIPR000313. PWWP_dom.
[Graphical view]
PfamiPF00855. PWWP. 1 hit.
[Graphical view]
PROSITEiPS50812. PWWP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q17R02-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MDFSFSFMQG IMGNTIQQPP QLIDSANIRQ EDAFDNNSDI VEDGGQTPYE
60 70 80 90 100
ATLQQGFQYP PTTEDLPPLT NGYPPSISMY ETQTKYQSYN QYPNGSANGF
110 120 130 140 150
GTVRNFSPSD YYHSEIPNTR PHEILEKPSP PQPPPPPPSV PQTVIPKKTG
160 170 180 190 200
SPEIKLKITK TIQNGRELFE SSLCGDLLNE VQASEHTKSK HESRKEKRKK
210 220 230 240 250
SNKHDSSRSE ERKSHKIPKL EPEEQNRPNE RVDPVSEKPR EDPVLKEETP
260 270 280 290 300
VQPMLPSVPT AEASAGVKFQ VGDLVWSKVG TYPWWPCMVS SDPQLEVHTK
310 320 330 340 350
INTRGAREYH VQFFSNQPER AWVHEKRVRE YKGHKQYEEL LAEATRQASN
360 370 380 390 400
HSEKQKIRKP RPQRERAQWD IGIAHAEKAL TMTREERIEQ YTFIYIDKQP
410 420 430 440 450
EETLSQAKKN VVSKAEVKKP RRPRSVLNVQ PEQTNAGEAA SSPSGTEMRR
460 470 480 490 500
HSQRRHTGVD EDEPPPVKVA WKTAAARKSL PASITMHKGS LDLQKCNMSP
510 520 530 540 550
VVKIEQVFAL QNATGDGKFI DQFVYSTKGI GNKTEISVRG QDRLIISTPN
560 570 580 590 600
QRNEKATQNM SSPEATSGSA GSVEKKQQRR SIRTRSESEK STEVVPKKKI
610 620 630 640
KKEQVETVPQ ATVKTGLQKG SADRGVQGSV RFSDSSVSAA IEETVD
Length:646
Mass (Da):72,735
Last modified:July 25, 2006 - v1
Checksum:i3311EDE78AD14201
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC118092 mRNA. Translation: AAI18093.1.
UniGeneiBt.11806.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC118092 mRNA. Translation: AAI18093.1.
UniGeneiBt.11806.

3D structure databases

ProteinModelPortaliQ17R02.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000053526.

Proteomic databases

PRIDEiQ17R02.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiCOG2940.
HOGENOMiHOG000122572.
HOVERGENiHBG083110.

Miscellaneous databases

NextBioi20870681.

Family and domain databases

InterProiIPR000313. PWWP_dom.
[Graphical view]
PfamiPF00855. PWWP. 1 hit.
[Graphical view]
PROSITEiPS50812. PWWP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: L1 HerefordImported.
    Tissue: UterusImported.

Entry informationi

Entry nameiQ17R02_BOVIN
AccessioniPrimary (citable) accession number: Q17R02
Entry historyi
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: October 29, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.